BLASTX nr result

ID: Cnidium21_contig00044391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044391
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277435.1| PREDICTED: vesicle-associated membrane prote...    89   9e-16
ref|XP_002321995.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002516661.1| conserved hypothetical protein [Ricinus comm...    57   4e-06

>ref|XP_002277435.1| PREDICTED: vesicle-associated membrane protein 727 [Vitis vinifera]
          Length = 273

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 57/151 (37%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
 Frame = +2

Query: 35  DPFVYFVIFDANLEKPLCVSFLKSVIGSFNRFFDQNPVKRLDCLKPHCFQGEFHPVFHQL 214
           DP+VYF IFD  +E+   + FL  V  +F      +P+K  D L  HCFQGEF+PVF QL
Sbjct: 65  DPYVYFGIFDEKMERYETLWFLNRVKEAFKGMIRNDPIKNFDDLSSHCFQGEFNPVFRQL 124

Query: 215 LVSPLGVE--------SPXXXXXXXXXXXXXXXXXRENRVGLTPLLGGSEKNVIKKKRRI 370
           L  P+  E        S                  R  R+   PLLG   K  +KKK+R+
Sbjct: 125 LSHPVEPEQLNLDLNSSLPQNVLKDKRNLSLDCSTRGKRIVSLPLLGKPGKG-LKKKKRL 183

Query: 371 FGEVSGSKKEVPKENKVDVSCDDGITLSREF 463
            GEV+G  ++   ENKV    DDG + +R+F
Sbjct: 184 SGEVNGDTRDHLMENKVVDVSDDGGSQTRDF 214


>ref|XP_002321995.1| predicted protein [Populus trichocarpa] gi|222868991|gb|EEF06122.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score = 59.3 bits (142), Expect(2) = 4e-07
 Identities = 37/118 (31%), Positives = 52/118 (44%)
 Frame = +2

Query: 35  DPFVYFVIFDANLEKPLCVSFLKSVIGSFNRFFDQNPVKRLDCLKPHCFQGEFHPVFHQL 214
           DPF YF IFD NL+K   + FL  V  +F  F     +K  + +   CFQGE   VF Q+
Sbjct: 64  DPFAYFAIFDENLQKSESLWFLNRVKDAFEEFLGAKMMKDGEKMGSFCFQGELRFVFRQI 123

Query: 215 LVSPLGVESPXXXXXXXXXXXXXXXXXRENRVGLTPLLGGSEKNVIKKKRRIFGEVSG 388
           L     + +                  +     + PLL    K ++KKK+R  GE +G
Sbjct: 124 LALDADLVNALMEESTKDSRNPSLDSTKAKGAVIRPLLPKPSKVLMKKKKRSPGEANG 181



 Score = 20.8 bits (42), Expect(2) = 4e-07
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 6   TYLYLIDDPLTLLFI 50
           TY +LIDDP     I
Sbjct: 57  TYTFLIDDPFAYFAI 71


>ref|XP_002516661.1| conserved hypothetical protein [Ricinus communis]
           gi|223544156|gb|EEF45680.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 280

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   HLFVLN**PIDPFVYFVIFDANLEKPLCVSFLKSVIGSFNRFFDQNPVKRLDCLKPHCFQ 184
           + F++N    DP  YFVI   +LEK  C  FL  V  +F  F   NPVK  D L  +CFQ
Sbjct: 58  YTFLIN----DPVAYFVISHESLEKSECFWFLNRVKIAFEEFSGANPVKDFDELTYNCFQ 113

Query: 185 GEFHPVFHQLLVSPLGVE-SPXXXXXXXXXXXXXXXXXRENRVGLTPLLGGSEKNVIKKK 361
            +F P+F  +L   L VE                    R  R  + PLL    K ++KKK
Sbjct: 114 EQFCPIFRNIL--SLNVELVDSLMEVPKDIRNPSLDSTRGKRSVVRPLLSKPAKLMMKKK 171

Query: 362 RR 367
           +R
Sbjct: 172 KR 173


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