BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044375
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    64   5e-11
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    62   5e-08
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    59   4e-07

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 64.3 bits (155), Expect(2) = 5e-11
 Identities = 43/108 (39%), Positives = 57/108 (52%)
 Frame = -2

Query: 423 IRNCSTKEKIGCIFVVMENGF*SRCDGKWKVGHRCNKKELSVLVTQEEDEDKMDDKLAEG 244
           IR  S KE    +    E+G   RCD KW +GHRC KKELS+L+  EE+E++    +   
Sbjct: 334 IRRLSEKE----LQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENI 389

Query: 243 DGGEVASVVLEEQTQPEISLYSEWIV*IQKP*KM*GSINSQAVIMMID 100
                    LE  + PEISL S   +   K  KM G+I  Q VI+M+D
Sbjct: 390 QPAHPDDSQLEIHS-PEISLNSVMGISSPKTLKMEGTIYGQKVIVMVD 436



 Score = 28.1 bits (61), Expect(2) = 5e-11
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 100 PGATHNFISQSTVQAL 53
           PGATHNFIS  TV+ L
Sbjct: 437 PGATHNFISLDTVRRL 452


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -2

Query: 372 ENGF*SRCDGKWKVGHRCNKKELSVLVTQEEDEDKMDDKLAEGDGGEVASV-VLEEQTQP 196
           E G   RCD KW VGHRC KKELSVL++ +EDE+    +L      E+ +  + E    P
Sbjct: 304 ERGLCFRCDDKWSVGHRC-KKELSVLLSCKEDEEIEYGELENAPQPEIPNTHIAETFVNP 362

Query: 195 EISLYSEWIV*IQKP*KM*GSINSQAVIMMID 100
           EISL S       K  K+ G+I  +AVI+MID
Sbjct: 363 EISLNSVMGFSNPKTLKLRGTIYGEAVIVMID 394


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 48/149 (32%), Positives = 72/149 (48%)
 Frame = -2

Query: 546 SSPSYKPHEIGASLSVFLLTAAKTEDQSSQVRTPKRYTNLTIRNCSTKEKIGCIFVVMEN 367
           S+ S K   I ++ S   +  AK    SS+     R   LT +    K   G  F     
Sbjct: 366 SNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMR--RLTEKELQEKRAKGLCF----- 418

Query: 366 GF*SRCDGKWKVGHRCNKKELSVLVTQEEDEDKMDDKLAEGDGGEVASVVLEEQTQPEIS 187
               +CD KW VGH+C +KELSVL  ++ +ED+++  L+    G  A     E+  PE+S
Sbjct: 419 ----KCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALS----GSEAPPSPTEEIPPEVS 470

Query: 186 LYSEWIV*IQKP*KM*GSINSQAVIMMID 100
           L S   +   K  K+ G I++  V++MID
Sbjct: 471 LNSVIGLSNPKTMKLSGLIDNHEVVVMID 499