BLASTX nr result

ID: Cnidium21_contig00044346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044346
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    75   4e-18
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    64   5e-15
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    71   6e-14
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    61   3e-12
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    61   2e-11

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 75.1 bits (183), Expect(2) = 4e-18
 Identities = 29/69 (42%), Positives = 40/69 (57%)
 Frame = +3

Query: 21  TNFWKQLWSLKLPGKVINFLWRACKGCLPTLQALATKKVNIDVQCPWCHRVQESDIHVLF 200
           T+FW + W LK+P KV N +W+ C  C+ T   L  + V++D  C WC+R  E+  HVLF
Sbjct: 425 TSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLF 484

Query: 201 ECDFANTVW 227
            C  A   W
Sbjct: 485 GCSMARECW 493



 Score = 40.8 bits (94), Expect(2) = 4e-18
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 325 ALFGMICWSIWNRRNKWVWDGANGSAFGVRAAAANLL 435
           A   ++C S+WN+RN WVW+  + + +GV + A  LL
Sbjct: 525 AKMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLL 561


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 63.9 bits (154), Expect(2) = 5e-15
 Identities = 29/66 (43%), Positives = 35/66 (53%)
 Frame = +3

Query: 30  WKQLWSLKLPGKVINFLWRACKGCLPTLQALATKKVNIDVQCPWCHRVQESDIHVLFECD 209
           W  +W LKLP KV NFLWRAC+ CLPT   L +K V    +C  C    E   H+ F C 
Sbjct: 366 WNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCS 425

Query: 210 FANTVW 227
            +   W
Sbjct: 426 KSMLYW 431



 Score = 41.6 bits (96), Expect(2) = 5e-15
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 316 EQVALFGMICWSIWNRRNKWVWDGANGSAFGVRAAAANLLNDWR 447
           +Q  +F +  WSIW  RN  VW+    +A  + A A +LL  WR
Sbjct: 464 QQKQIFSVTLWSIWKHRNNKVWNNITDTAQDICARAGSLLTSWR 507


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 70.9 bits (172), Expect(2) = 6e-14
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +3

Query: 9   SSAHTNF-WKQLWSLKLPGKVINFLWRACKGCLPTLQALATKKVNIDVQCPWCHRVQESD 185
           S   +NF W QLW +  P K++NF WRA + CLPT  AL  + V+  + CP C    E+ 
Sbjct: 500 SDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETT 559

Query: 186 IHVLFECDFANTVW 227
           +H L EC  A  VW
Sbjct: 560 LHALVECVAARDVW 573



 Score = 31.2 bits (69), Expect(2) = 6e-14
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 340 ICWSIWNRRNKWVWDGANGSAFGVRAAAANLLNDW 444
           +CW +W RRN  VW+G    +  V      +L  W
Sbjct: 610 VCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESW 644


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 61.2 bits (147), Expect(2) = 3e-12
 Identities = 26/66 (39%), Positives = 34/66 (51%)
 Frame = +3

Query: 30   WKQLWSLKLPGKVINFLWRACKGCLPTLQALATKKVNIDVQCPWCHRVQESDIHVLFECD 209
            W  LW+LK+P KV  FLWR+C+  LPT   L  + VN    C  C    E  +H+ F C 
Sbjct: 1417 WVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCT 1476

Query: 210  FANTVW 227
             +   W
Sbjct: 1477 KSRQCW 1482



 Score = 35.0 bits (79), Expect(2) = 3e-12
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 319  QVALFGMICWSIWNRRNKWVWDGANGSAFGVRAAAANLLNDWR 447
            Q  ++  + WSIW +RN  +W     +   VR    NLL  W+
Sbjct: 1516 QRVIWACVMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQ 1558


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 60.8 bits (146), Expect(2) = 2e-11
 Identities = 26/67 (38%), Positives = 33/67 (49%)
 Frame = +3

Query: 27  FWKQLWSLKLPGKVINFLWRACKGCLPTLQALATKKVNIDVQCPWCHRVQESDIHVLFEC 206
           +W  +W LK+P K+ NF+WR C+G LPT   L  K V     C  C    E   H+   C
Sbjct: 260 YWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVC 319

Query: 207 DFANTVW 227
            F   VW
Sbjct: 320 TFDVQVW 326



 Score = 32.3 bits (72), Expect(2) = 2e-11
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 316 EQVALFGMICWSIWNRRNKWVWDGANGSAFGVRAAAANLLNDWR 447
           EQ  +F +  WS+W RRN  VW+  N S       A  ++ +W+
Sbjct: 359 EQSQIF-VTMWSLWKRRNLKVWENKNESCAMTVDRARVMMEEWQ 401


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