BLASTX nr result

ID: Cnidium21_contig00044343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044343
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   115   3e-24
emb|CBI40396.3| unnamed protein product [Vitis vinifera]              115   3e-24
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   115   3e-24
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   100   1e-19
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...    99   5e-19

>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  115 bits (289), Expect = 3e-24
 Identities = 66/102 (64%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   IDLSVPANANLMAQLIPLMQSRMVAQHTPSETNMDAQSSSVTMSKQQVTSPQVANENSPR 181
           IDLS+PANANLMAQLIPLMQ+RMV Q  P+E+NM AQ S V   KQQVTSP VA+ENSP 
Sbjct: 286 IDLSLPANANLMAQLIPLMQTRMVTQPKPNESNMGAQPSPVQGPKQQVTSPPVASENSPH 345

Query: 182 GNSSSDVSGHFSMGKVMRQTSQPGLFGAS-TASIVPNANHHP 304
           GNSSSDVSG     K  RQT  P  FG++  A+IV N N+ P
Sbjct: 346 GNSSSDVSGQSGSAKA-RQTVPPSPFGSNPNAAIVNNTNNIP 386


>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
          Length = 1981

 Score =  115 bits (289), Expect = 3e-24
 Identities = 66/102 (64%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   IDLSVPANANLMAQLIPLMQSRMVAQHTPSETNMDAQSSSVTMSKQQVTSPQVANENSPR 181
           IDLS+PANANLMAQLIPLMQ+RMV Q  P+E+NM AQ S V   KQQVTSP VA+ENSP 
Sbjct: 286 IDLSLPANANLMAQLIPLMQTRMVTQPKPNESNMGAQPSPVQGPKQQVTSPPVASENSPH 345

Query: 182 GNSSSDVSGHFSMGKVMRQTSQPGLFGAS-TASIVPNANHHP 304
           GNSSSDVSG     K  RQT  P  FG++  A+IV N N+ P
Sbjct: 346 GNSSSDVSGQSGSAKA-RQTVPPSPFGSNPNAAIVNNTNNIP 386


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  115 bits (289), Expect = 3e-24
 Identities = 66/102 (64%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   IDLSVPANANLMAQLIPLMQSRMVAQHTPSETNMDAQSSSVTMSKQQVTSPQVANENSPR 181
           IDLS+PANANLMAQLIPLMQ+RMV Q  P+E+NM AQ S V   KQQVTSP VA+ENSP 
Sbjct: 286 IDLSLPANANLMAQLIPLMQTRMVTQPKPNESNMGAQPSPVQGPKQQVTSPPVASENSPH 345

Query: 182 GNSSSDVSGHFSMGKVMRQTSQPGLFGAS-TASIVPNANHHP 304
           GNSSSDVSG     K  RQT  P  FG++  A+IV N N+ P
Sbjct: 346 GNSSSDVSGQSGSAKA-RQTVPPSPFGSNPNAAIVNNTNNIP 386


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
           gi|223549062|gb|EEF50551.1| Chromo domain protein,
           putative [Ricinus communis]
          Length = 2248

 Score =  100 bits (249), Expect = 1e-19
 Identities = 62/101 (61%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
 Frame = +2

Query: 2   IDLSVPANANLMAQLIPLMQSRMVAQHTPSETNMDAQSS--SVTMSKQQVTSPQVANENS 175
           IDLS+PANANLMAQLIPLMQSRM AQ   +E+N  AQ+S   V++SK QV SP VA+E+S
Sbjct: 279 IDLSLPANANLMAQLIPLMQSRMAAQQKANESNAGAQASPVPVSVSKHQVASPPVASESS 338

Query: 176 PRGNSSSDVSGHFSMGKVMRQTSQPGLFGASTAS-IVPNAN 295
           P  NSSSDVSG     K  RQT   G FG+S+ S IV +AN
Sbjct: 339 PHANSSSDVSGQSGPPKA-RQTVPSGPFGSSSNSGIVNSAN 378


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/99 (58%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   IDLSVPANANLMAQLIPLMQSRMVAQHTPSETNMDAQSSSVTMSKQQVTSPQVANENSPR 181
           IDLS PANA+LMAQLIPLMQSRMV+Q   +E+++ AQSS V +SKQQVTSP VA+E+S  
Sbjct: 276 IDLSHPANAHLMAQLIPLMQSRMVSQSKVNESSIGAQSSPVPVSKQQVTSPAVASESSAH 335

Query: 182 GNSSSDVSGHFSMGKVMRQTSQPGLFGAST-ASIVPNAN 295
            NSSSD+SG     K  RQT+ P   G+ T A I  N++
Sbjct: 336 ANSSSDMSGQSGSSKA-RQTAPPSHLGSITNAGIAGNSS 373


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