BLASTX nr result

ID: Cnidium21_contig00044333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044333
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853...   138   4e-31
emb|CBI33069.3| unnamed protein product [Vitis vinifera]              138   4e-31
emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]   138   4e-31
ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
gb|AFQ22739.1| growth-regulating factor 2P, partial [Brassica ra...   125   3e-27

>ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera]
          Length = 597

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/101 (65%), Positives = 74/101 (73%)
 Frame = +1

Query: 34  GYGCGGSTGGMDGPFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLFQIRKSLNP 213
           G+G G     M G F   R PFTPSQW++LE QALIYKYI ANVPVPS+LL  IRKSLNP
Sbjct: 135 GFGSGSLNTSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNP 194

Query: 214 FLYAGSLAGSYAPKSFGWGTFHLGLSGSNDPEPGRCRRTDG 336
           F  +GS + S A  S  WG+FHLG SG+ DPEPGRCRRTDG
Sbjct: 195 FGLSGSSSTSLAHNSLSWGSFHLGFSGNTDPEPGRCRRTDG 235


>emb|CBI33069.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/101 (65%), Positives = 74/101 (73%)
 Frame = +1

Query: 34  GYGCGGSTGGMDGPFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLFQIRKSLNP 213
           G+G G     M G F   R PFTPSQW++LE QALIYKYI ANVPVPS+LL  IRKSLNP
Sbjct: 146 GFGSGSLNTSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNP 205

Query: 214 FLYAGSLAGSYAPKSFGWGTFHLGLSGSNDPEPGRCRRTDG 336
           F  +GS + S A  S  WG+FHLG SG+ DPEPGRCRRTDG
Sbjct: 206 FGLSGSSSTSLAHNSLSWGSFHLGFSGNTDPEPGRCRRTDG 246


>emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]
          Length = 497

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/101 (65%), Positives = 74/101 (73%)
 Frame = +1

Query: 34  GYGCGGSTGGMDGPFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLFQIRKSLNP 213
           G+G G     M G F   R PFTPSQW++LE QALIYKYI ANVPVPS+LL  IRKSLNP
Sbjct: 35  GFGSGSLNTSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNP 94

Query: 214 FLYAGSLAGSYAPKSFGWGTFHLGLSGSNDPEPGRCRRTDG 336
           F  +GS + S A  S  WG+FHLG SG+ DPEPGRCRRTDG
Sbjct: 95  FGLSGSSSTSLAHNSLSWGSFHLGFSGNTDPEPGRCRRTDG 135


>ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|222861441|gb|EEE98983.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
 Frame = +1

Query: 34  GYGCGGSTGGMDGPFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLFQIRKSLNP 213
           GY  GG   GM GP T  R PFTPSQW++LE QALIYKYI A VPVPS+L+  ++KS+ P
Sbjct: 143 GYDTGGLNAGMHGPLTGVRGPFTPSQWMELEHQALIYKYITARVPVPSNLIIPLKKSVYP 202

Query: 214 FLYAGSLAGSYAPKSFGWGTFHLGLSGSN-DPEPGRCRRTDG 336
           +   GS  GS+   S GW  FHLG  G+N DPEPGRCRRTDG
Sbjct: 203 YSLPGSSTGSFPHNSLGWSAFHLGYPGNNTDPEPGRCRRTDG 244


>gb|AFQ22739.1| growth-regulating factor 2P, partial [Brassica rapa subsp.
           pekinensis]
          Length = 446

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/109 (59%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
 Frame = +1

Query: 13  YQDFSRQGYGCGGSTGGMDGPFTRCREPFTPSQWLDLELQALIYKYIVANVPVPSHLLFQ 192
           Y+ +S  GYGCGG    M G       PFT +QW +LE QALIYKYI ANVPVPS LL  
Sbjct: 110 YRSYSGGGYGCGGMMMSMQG-----EGPFTLTQWAELEQQALIYKYITANVPVPSSLLIS 164

Query: 193 IRKSLNPFLYAGSLAGSYAPKSFGWGTFHLGLSGSN-DPEPGRCRRTDG 336
           I+KS  P+       GS  P SFGWGTFHLG +G N DPEPGRCRRTDG
Sbjct: 165 IQKSFFPY-------GSLPPSSFGWGTFHLGFAGGNMDPEPGRCRRTDG 206


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