BLASTX nr result

ID: Cnidium21_contig00044307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044307
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60326.1| hypothetical protein VITISV_028596 [Vitis vinifera]   144   6e-33
ref|XP_002269461.2| PREDICTED: dof zinc finger protein DOF5.2-li...   141   5e-32
ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002323863.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002531852.1| zinc finger protein, putative [Ricinus commu...   125   3e-27

>emb|CAN60326.1| hypothetical protein VITISV_028596 [Vitis vinifera]
          Length = 475

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/152 (48%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
 Frame = -3

Query: 449 SSSTVLNPNEK--VFGVKPKMKNVQESPIQLPCFPVPPWASPWNTAEWRSAKQQPAFCPP 276
           SS T+ N  EK  + G++P +KN Q  P  +PCFP   W+ PWN A+W S    PAFCPP
Sbjct: 266 SSITLTNSAEKGNIAGLEPVVKNFQAFPPHVPCFPGASWSYPWNPAQWSSKIPPPAFCPP 325

Query: 275 GFPSSFYPTPPNWGCPAPNPWNMPWLSPQCFSGELSVRGPASNYQILGKHSRDGSNIRSS 96
           GFP SFYP P  WGC  P  WN+P + P   S   S      N   LGKH+RDG  +  +
Sbjct: 326 GFPISFYPAPAYWGCTVPGSWNIPCIPPTSSSPIHSALATNHNSPTLGKHARDGEVLNPA 385

Query: 95  NPEKL-HLEEGNFKRGVLTHKTLRIHDPIEAA 3
           NP K  H +E N +RGV   KTLRI DP EAA
Sbjct: 386 NPGKEDHQKENNPERGVWIPKTLRIDDPNEAA 417


>ref|XP_002269461.2| PREDICTED: dof zinc finger protein DOF5.2-like [Vitis vinifera]
          Length = 477

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/152 (48%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
 Frame = -3

Query: 449 SSSTVLNPNEK--VFGVKPKMKNVQESPIQLPCFPVPPWASPWNTAEWRSAKQQPAFCPP 276
           SS T+ N  EK  + G++P +KN Q     +PCFP   W+ PWN A+W S    PAFCPP
Sbjct: 268 SSITLTNSAEKGNIAGLEPVVKNFQAFSPHVPCFPGASWSYPWNPAQWSSKIPPPAFCPP 327

Query: 275 GFPSSFYPTPPNWGCPAPNPWNMPWLSPQCFSGELSVRGPASNYQILGKHSRDGSNIRSS 96
           GFP SFYP P  WGC  P  WN+P + P   S   S      N   LGKH+RDG  +  +
Sbjct: 328 GFPISFYPAPAYWGCTVPGSWNIPCIPPTSSSPIHSALATNHNSPTLGKHARDGEVLNPA 387

Query: 95  NPEKL-HLEEGNFKRGVLTHKTLRIHDPIEAA 3
           NP K  H +E N +RGV   KTLRI DP EAA
Sbjct: 388 NPGKEDHQKENNPERGVWIPKTLRIDDPNEAA 419


>ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|222848996|gb|EEE86543.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  134 bits (338), Expect = 6e-30
 Identities = 72/154 (46%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
 Frame = -3

Query: 452 GSSSTVLNPNE---KVFGVKPKMKNVQESPIQLPCFPVPPWASPWNTAEWRSAKQQPAFC 282
           GSS TV N  +   K    +  M+N Q  P ++PCFP  PW  PWN+A+W S    PAFC
Sbjct: 288 GSSVTVSNSIDEAGKSMSKESAMQNCQGFPPEIPCFPGVPWPYPWNSAQWSSPLPPPAFC 347

Query: 281 PPGFPSSFYPTPPNWGCPAPNPWNMPWLSPQCFSGELSVRGPASNYQILGKHSRDGSNIR 102
           PPGFP  FYP    WGC  P  WN+PWL PQ  S + +      N   LGKHSRD + ++
Sbjct: 348 PPGFPMPFYPAAAYWGCTVPGAWNIPWL-PQPSSPKQTSSSSGPNSPTLGKHSRDENMLK 406

Query: 101 SSNPEK-LHLEEGNFKRGVLTHKTLRIHDPIEAA 3
           SSN E+    +E N +R +   KTLRI DP EAA
Sbjct: 407 SSNSEEGESAKENNTERCLWIPKTLRIVDPGEAA 440


>ref|XP_002323863.1| predicted protein [Populus trichocarpa] gi|222866865|gb|EEF03996.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  126 bits (316), Expect = 2e-27
 Identities = 69/153 (45%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
 Frame = -3

Query: 452 GSSSTVLNPNE---KVFGVKPKMKNVQESPIQLPCFPVPPWASPWNTAEWRSAKQQPAFC 282
           GSS TV N ++   K    +  M+N Q  P Q+PCFP  PW  PWN+A+W S    PAFC
Sbjct: 298 GSSVTVSNSSDEAGKSVSKESAMQNYQGYPPQIPCFPGVPWPYPWNSAQWSSPVPPPAFC 357

Query: 281 PPGFPSSFYPTPPNWGCPAPNPWNMPWLSPQCFSGELSVRGPASNYQILGKHSRDGSNIR 102
           P  FP  FYP    WGC  P  WN+PWL PQ  S + +      N   LGKHSRD + ++
Sbjct: 358 PSSFPMPFYPAAAYWGCTVPGAWNVPWL-PQPSSPKQTSSSSDPNSPTLGKHSRDENLLK 416

Query: 101 SSNPEKLHLEEGNFKRGVLTHKTLRIHDPIEAA 3
            SN ++   E  N +R +   KTLRI DP EAA
Sbjct: 417 PSNSKE---ELVNTERCLWIPKTLRIDDPGEAA 446


>ref|XP_002531852.1| zinc finger protein, putative [Ricinus communis]
           gi|223528502|gb|EEF30530.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 497

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/154 (42%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
 Frame = -3

Query: 452 GSSSTVLNPNEKVFGVKPK---MKNVQESPIQLPCFPVPPWASPWNTAEWRSAKQQPAFC 282
           GS +T  N  ++     P+   ++N Q  P Q+PC+P  PW  PWN+A+W S     AFC
Sbjct: 285 GSLATASNSKDEASKSGPQATVIQNCQGFPPQIPCYPGTPWPYPWNSAQWSSPVPPTAFC 344

Query: 281 PPGFPSSFYPTPPNWGCPAPNPWNMPWL-SPQCFSGELSVRGPASNYQILGKHSRDGSNI 105
           PPGFP  FYPT   WGC  P  WNM W+  P   +   S  GP  N   LGKHSRD + +
Sbjct: 345 PPGFPMPFYPTTAYWGCTVPGTWNMSWIPQPPSPNETASTSGP--NSPTLGKHSRDDNML 402

Query: 104 RSSNPEKLHLEEGNFKRGVLTHKTLRIHDPIEAA 3
           + SN  +   +E + +R +   KTLRI DP EAA
Sbjct: 403 KPSNSGETPEKEKSAERCLWIPKTLRIDDPGEAA 436


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