BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044261
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006607891.1| capsid protein [Soybean Putnam virus] gi|401...    93   3e-17
ref|NP_612576.1| Coat protein [Carnation etched ring virus] gi|1...    92   3e-17
gb|ADY76948.1| coat protein [Carnation etched ring virus] gi|352...    92   3e-17
emb|CAH68828.1| coat protein [Carnation etched ring virus]             92   3e-17
emb|CAD79321.2| coat protein [Carnation etched ring virus]             92   3e-17

>ref|YP_006607891.1| capsid protein [Soybean Putnam virus] gi|401620159|gb|AFP95349.1|
           capsid protein [Soybean Putnam virus]
          Length = 498

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = +3

Query: 75  DYGCRPSDRVXXXXXXXXXXXXXXXXXXXXXXXXXXPGRFVREKNQSSDKQKFCPKGKKN 254
           DYGC+   +                           P +F R+ +++  K+KFCPKGKKN
Sbjct: 362 DYGCKVKSKRKVFKYEKKRSSKHKRFQKRYVKKSFKPSKFARKPSKNPSKEKFCPKGKKN 421

Query: 255 CMCWVCN-EGHYANECPNRKKHNGKVQMLEQIYSLGFIPIEDPCE 386
           C CW+C+ EGHYANECPN++ +  + +M +++ S G +PIE+P E
Sbjct: 422 CRCWICSEEGHYANECPNKENNKKQFKMFQEVLSQGLVPIEEPYE 466


>ref|NP_612576.1| Coat protein [Carnation etched ring virus]
           gi|116723|sp|P05399.1|CAPSD_CERV RecName: Full=Probable
           capsid protein; Short=CP; AltName: Full=Coat protein
           gi|58862|emb|CAA28359.1| unnamed protein product
           [Carnation etched ring virus] gi|225355|prf||1301227D
           ORF 4
          Length = 494

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +3

Query: 63  EKPFDYGCRPSDRVXXXXXXXXXXXXXXXXXXXXXXXXXXPGRFVREKNQSSDKQKFCPK 242
           EKP++YGC+PS                             PG++ + K++ S+K K+CPK
Sbjct: 355 EKPYEYGCKPSYS-KKKKYSKKYKPKYTKYKVIRKKKKFSPGKYFKPKDKKSEKAKYCPK 413

Query: 243 GKKNCMCWVCN-EGHYANECPNRKKHNGKVQMLEQIYSLGFIPIEDPCEDIQ 395
           GKK C CWVCN EGHYANECPNR+  + K ++++   + G  PIE+P ED Q
Sbjct: 414 GKKTCRCWVCNIEGHYANECPNRQT-SEKFKLIQIAENYGLEPIENPYEDQQ 464


>gb|ADY76948.1| coat protein [Carnation etched ring virus]
           gi|352144787|gb|AEQ61913.1| coat protein [Carnation
           etched ring virus]
          Length = 444

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +3

Query: 63  EKPFDYGCRPSDRVXXXXXXXXXXXXXXXXXXXXXXXXXXPGRFVREKNQSSDKQKFCPK 242
           EKP++YGC+PS                             PG++ + K++ S+K K+CPK
Sbjct: 321 EKPYEYGCKPSYS-KKKKYSKKYKPKYTKYKVIRKKKKFSPGKYFKPKDKKSEKAKYCPK 379

Query: 243 GKKNCMCWVCN-EGHYANECPNRKKHNGKVQMLEQIYSLGFIPIEDPCEDIQ 395
           GKK C CWVCN EGHYANECPNR+  + K ++++   + G  PIE+P ED Q
Sbjct: 380 GKKTCRCWVCNIEGHYANECPNRQT-SEKFKLIQIAENYGLEPIENPYEDQQ 430


>emb|CAH68828.1| coat protein [Carnation etched ring virus]
          Length = 493

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +3

Query: 63  EKPFDYGCRPSDRVXXXXXXXXXXXXXXXXXXXXXXXXXXPGRFVREKNQSSDKQKFCPK 242
           EKP++YGC+PS                             PG++ + K++ S+K K+CPK
Sbjct: 354 EKPYEYGCKPSYS-KKKKYSKKYKPKYTKYKVIREKKKFSPGKYFKPKDKKSEKAKYCPK 412

Query: 243 GKKNCMCWVCN-EGHYANECPNRKKHNGKVQMLEQIYSLGFIPIEDPCEDIQ 395
           GKK C CWVCN EGHYANECPNR+  + K ++++   + G  PIE+P ED Q
Sbjct: 413 GKKTCRCWVCNIEGHYANECPNRQT-SEKFKLIQIAENYGLEPIENPYEDQQ 463


>emb|CAD79321.2| coat protein [Carnation etched ring virus]
          Length = 235

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +3

Query: 63  EKPFDYGCRPSDRVXXXXXXXXXXXXXXXXXXXXXXXXXXPGRFVREKNQSSDKQKFCPK 242
           EKP++YGC+PS                             PG++ + K++ S+K K+CPK
Sbjct: 96  EKPYEYGCKPSYS-KKKKYSKKYKPKYTKYKVIREKKKFSPGKYFKPKDKKSEKAKYCPK 154

Query: 243 GKKNCMCWVCN-EGHYANECPNRKKHNGKVQMLEQIYSLGFIPIEDPCEDIQ 395
           GKK C CWVCN EGHYANECPNR+  + K ++++   + G  PIE+P ED Q
Sbjct: 155 GKKTCRCWVCNIEGHYANECPNRQT-SEKFKLIQIAENYGLEPIENPYEDQQ 205