BLASTX nr result

ID: Cnidium21_contig00044197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044197
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564206.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   108   3e-22
ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   108   3e-22
ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   108   3e-22
ref|XP_001773533.1| predicted protein [Physcomitrella patens sub...   108   5e-22
tpg|DAA42448.1| TPA: putative DEAD-box ATP-dependent RNA helicas...   107   8e-22

>ref|XP_003564206.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like
           [Brachypodium distachyon]
          Length = 637

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/74 (70%), Positives = 59/74 (79%)
 Frame = -3

Query: 382 RERALRSIKNGPTPILVATDVVASGLDVPDITHVINFDLSKDIDDYVHKIGKTGRGGKSG 203
           RE ALRS K+G TPILVATDV A GLD+PD+ HVINFDL  DIDDYVH+IG+TGR GKSG
Sbjct: 474 REYALRSFKSGATPILVATDVAARGLDIPDVAHVINFDLPNDIDDYVHRIGRTGRAGKSG 533

Query: 202 PTTTFFSEKYSALA 161
             T FF+E   +LA
Sbjct: 534 VATAFFNEGNMSLA 547


>ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine
           max]
          Length = 586

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/74 (68%), Positives = 61/74 (82%)
 Frame = -3

Query: 382 RERALRSIKNGPTPILVATDVVASGLDVPDITHVINFDLSKDIDDYVHKIGKTGRGGKSG 203
           RERALRS K+G TPILVATDV + GLD+P + HVINFDL +DID+YVH+IG+TGR GKSG
Sbjct: 375 RERALRSFKSGVTPILVATDVASRGLDIPHVAHVINFDLPRDIDNYVHRIGRTGRAGKSG 434

Query: 202 PTTTFFSEKYSALA 161
             T FFS+K S +A
Sbjct: 435 LATAFFSDKNSPIA 448


>ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine
           max]
          Length = 610

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/76 (68%), Positives = 62/76 (81%)
 Frame = -3

Query: 382 RERALRSIKNGPTPILVATDVVASGLDVPDITHVINFDLSKDIDDYVHKIGKTGRGGKSG 203
           RERALRS K+G TPILVATDV + GLD+P + HVINFDL +DID+YVH+IG+TGR GKSG
Sbjct: 394 RERALRSFKSGLTPILVATDVASRGLDIPHVAHVINFDLPRDIDNYVHRIGRTGRAGKSG 453

Query: 202 PTTTFFSEKYSALAIA 155
             T FFS+K S +A A
Sbjct: 454 LATAFFSDKNSPIAKA 469


>ref|XP_001773533.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162675235|gb|EDQ61733.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 600

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/74 (68%), Positives = 58/74 (78%)
 Frame = -3

Query: 382 RERALRSIKNGPTPILVATDVVASGLDVPDITHVINFDLSKDIDDYVHKIGKTGRGGKSG 203
           RE ALRS + G TPILVATDV A GLD+P + HV+NFDL  DIDDYVH+IG+TGR GKSG
Sbjct: 443 REHALRSFRTGVTPILVATDVAARGLDIPHVAHVVNFDLPSDIDDYVHRIGRTGRAGKSG 502

Query: 202 PTTTFFSEKYSALA 161
             T FF+EK  ALA
Sbjct: 503 VATAFFNEKDQALA 516


>tpg|DAA42448.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
           [Zea mays]
          Length = 643

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/74 (68%), Positives = 58/74 (78%)
 Frame = -3

Query: 382 RERALRSIKNGPTPILVATDVVASGLDVPDITHVINFDLSKDIDDYVHKIGKTGRGGKSG 203
           RE ALRS K+G TPILVATDV A GLD+P + HVINFDL  DIDDYVH+IG+TGR GKSG
Sbjct: 474 REHALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSG 533

Query: 202 PTTTFFSEKYSALA 161
             T FF+E  + LA
Sbjct: 534 LATAFFNESNTTLA 547


Top