BLASTX nr result
ID: Cnidium21_contig00044169
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00044169 (413 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34941.3| unnamed protein product [Vitis vinifera] 130 1e-28 ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu... 119 2e-25 ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain... 118 6e-25 ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain... 111 5e-23 ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain... 99 5e-19 >emb|CBI34941.3| unnamed protein product [Vitis vinifera] Length = 1907 Score = 130 bits (327), Expect = 1e-28 Identities = 74/145 (51%), Positives = 98/145 (67%), Gaps = 9/145 (6%) Frame = -1 Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLAGQHEE- 237 SCWHDK+TGSLF+C+V DGGDSGP+FKVKR +CS +P+P GSTVL + NLGQ GQ +E Sbjct: 293 SCWHDKLTGSLFMCDVSDGGDSGPIFKVKRCACSAIPLPNGSTVLCRPNLGQSNGQDKEK 352 Query: 236 -NNFYSISA--DEDYSILMMLSDPS-PQEHDLLSCLGSTICSND----QTSEGQFLETSS 81 N+ S+S DED S+ +L+DPS P E+D+LSC+ S+ SN QT LE +S Sbjct: 353 SNDMISLSMDYDEDGSLQTLLADPSPPMENDILSCIRSS--SNGSCCVQTLNSLLLEDNS 410 Query: 80 CEGKPKNVLIDYTVLQDVIGEISVE 6 L D++ L+D IGE S++ Sbjct: 411 LHESSGEFLSDHSRLKDEIGEFSLQ 435 >ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis] gi|223543360|gb|EEF44891.1| DNA binding protein, putative [Ricinus communis] Length = 2145 Score = 119 bits (299), Expect = 2e-25 Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 5/99 (5%) Frame = -1 Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLAGQH--E 240 SCWHD+VTGSLFICEVLDGGDSGP+FKV+R SCS +PIPVGST+LY+ N Q AGQ+ E Sbjct: 445 SCWHDRVTGSLFICEVLDGGDSGPIFKVRRFSCSSIPIPVGSTILYRRNPYQFAGQNSKE 504 Query: 239 ENNF--YSISADEDYSILMMLSDPS-PQEHDLLSCLGST 132 N+ Y + D D SI M+L+D S P E D+++CL T Sbjct: 505 YNDVINYDMDRDNDGSIEMILADSSPPTEDDIMTCLSYT 543 >ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis vinifera] Length = 2164 Score = 118 bits (295), Expect = 6e-25 Identities = 59/99 (59%), Positives = 77/99 (77%), Gaps = 5/99 (5%) Frame = -1 Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLAGQHEE- 237 SCWHDK+TGSLF+C+V DGGDSGP+FKVKR +CS +P+P GSTVL + NLGQ GQ +E Sbjct: 430 SCWHDKLTGSLFMCDVSDGGDSGPIFKVKRCACSAIPLPNGSTVLCRPNLGQSNGQDKEK 489 Query: 236 -NNFYSISA--DEDYSILMMLSDPS-PQEHDLLSCLGST 132 N+ S+S DED S+ +L+DPS P E+D+LSC+ S+ Sbjct: 490 SNDMISLSMDYDEDGSLQTLLADPSPPMENDILSCIRSS 528 >ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Cucumis sativus] Length = 1028 Score = 111 bits (278), Expect = 5e-23 Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 5/142 (3%) Frame = -1 Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLA-GQHEE 237 SCWHDKVTGS+FI EVLDGGDSGP+FKV+R CS PIPVGSTVL K + Q +E Sbjct: 553 SCWHDKVTGSIFINEVLDGGDSGPLFKVRRCPCSAFPIPVGSTVLSKGKSENFSIEQQKE 612 Query: 236 NNFYSISADEDYSILMMLSDPSPQEHDLLSCLGSTICS----NDQTSEGQFLETSSCEGK 69 + + S D++ + P P E D+LSCLG +CS N G E S GK Sbjct: 613 DGLINNSNDDNLQTIFSDVCP-PNEDDILSCLG--VCSDRDFNVHMQNGLHDEAGSI-GK 668 Query: 68 PKNVLIDYTVLQDVIGEISVEE 3 + L DY L+D IGEISVE+ Sbjct: 669 SGD-LSDYQYLKDEIGEISVED 689 >ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Cucumis sativus] Length = 2131 Score = 98.6 bits (244), Expect = 5e-19 Identities = 53/99 (53%), Positives = 66/99 (66%), Gaps = 1/99 (1%) Frame = -1 Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLA-GQHEE 237 SCWHDKVTGS+FI EVLDGGDSGP+FKV+R CS PIPVGSTVL K + Q +E Sbjct: 442 SCWHDKVTGSIFINEVLDGGDSGPLFKVRRCPCSAFPIPVGSTVLSKGKSENFSIEQQKE 501 Query: 236 NNFYSISADEDYSILMMLSDPSPQEHDLLSCLGSTICSN 120 + + S D++ + P P E D+LSCLG +CS+ Sbjct: 502 DGLINNSNDDNLQTIFSDVCP-PNEDDILSCLG--VCSD 537