BLASTX nr result

ID: Cnidium21_contig00044169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044169
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34941.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   119   2e-25
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   118   6e-25
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...   111   5e-23
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    99   5e-19

>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score =  130 bits (327), Expect = 1e-28
 Identities = 74/145 (51%), Positives = 98/145 (67%), Gaps = 9/145 (6%)
 Frame = -1

Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLAGQHEE- 237
           SCWHDK+TGSLF+C+V DGGDSGP+FKVKR +CS +P+P GSTVL + NLGQ  GQ +E 
Sbjct: 293 SCWHDKLTGSLFMCDVSDGGDSGPIFKVKRCACSAIPLPNGSTVLCRPNLGQSNGQDKEK 352

Query: 236 -NNFYSISA--DEDYSILMMLSDPS-PQEHDLLSCLGSTICSND----QTSEGQFLETSS 81
            N+  S+S   DED S+  +L+DPS P E+D+LSC+ S+  SN     QT     LE +S
Sbjct: 353 SNDMISLSMDYDEDGSLQTLLADPSPPMENDILSCIRSS--SNGSCCVQTLNSLLLEDNS 410

Query: 80  CEGKPKNVLIDYTVLQDVIGEISVE 6
                   L D++ L+D IGE S++
Sbjct: 411 LHESSGEFLSDHSRLKDEIGEFSLQ 435


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
           gi|223543360|gb|EEF44891.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2145

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
 Frame = -1

Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLAGQH--E 240
           SCWHD+VTGSLFICEVLDGGDSGP+FKV+R SCS +PIPVGST+LY+ N  Q AGQ+  E
Sbjct: 445 SCWHDRVTGSLFICEVLDGGDSGPIFKVRRFSCSSIPIPVGSTILYRRNPYQFAGQNSKE 504

Query: 239 ENNF--YSISADEDYSILMMLSDPS-PQEHDLLSCLGST 132
            N+   Y +  D D SI M+L+D S P E D+++CL  T
Sbjct: 505 YNDVINYDMDRDNDGSIEMILADSSPPTEDDIMTCLSYT 543


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/99 (59%), Positives = 77/99 (77%), Gaps = 5/99 (5%)
 Frame = -1

Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLAGQHEE- 237
           SCWHDK+TGSLF+C+V DGGDSGP+FKVKR +CS +P+P GSTVL + NLGQ  GQ +E 
Sbjct: 430 SCWHDKLTGSLFMCDVSDGGDSGPIFKVKRCACSAIPLPNGSTVLCRPNLGQSNGQDKEK 489

Query: 236 -NNFYSISA--DEDYSILMMLSDPS-PQEHDLLSCLGST 132
            N+  S+S   DED S+  +L+DPS P E+D+LSC+ S+
Sbjct: 490 SNDMISLSMDYDEDGSLQTLLADPSPPMENDILSCIRSS 528


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score =  111 bits (278), Expect = 5e-23
 Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
 Frame = -1

Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLA-GQHEE 237
           SCWHDKVTGS+FI EVLDGGDSGP+FKV+R  CS  PIPVGSTVL K      +  Q +E
Sbjct: 553 SCWHDKVTGSIFINEVLDGGDSGPLFKVRRCPCSAFPIPVGSTVLSKGKSENFSIEQQKE 612

Query: 236 NNFYSISADEDYSILMMLSDPSPQEHDLLSCLGSTICS----NDQTSEGQFLETSSCEGK 69
           +   + S D++   +     P P E D+LSCLG  +CS    N     G   E  S  GK
Sbjct: 613 DGLINNSNDDNLQTIFSDVCP-PNEDDILSCLG--VCSDRDFNVHMQNGLHDEAGSI-GK 668

Query: 68  PKNVLIDYTVLQDVIGEISVEE 3
             + L DY  L+D IGEISVE+
Sbjct: 669 SGD-LSDYQYLKDEIGEISVED 689


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/99 (53%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
 Frame = -1

Query: 413 SCWHDKVTGSLFICEVLDGGDSGPVFKVKRSSCSRLPIPVGSTVLYKSNLGQLA-GQHEE 237
           SCWHDKVTGS+FI EVLDGGDSGP+FKV+R  CS  PIPVGSTVL K      +  Q +E
Sbjct: 442 SCWHDKVTGSIFINEVLDGGDSGPLFKVRRCPCSAFPIPVGSTVLSKGKSENFSIEQQKE 501

Query: 236 NNFYSISADEDYSILMMLSDPSPQEHDLLSCLGSTICSN 120
           +   + S D++   +     P P E D+LSCLG  +CS+
Sbjct: 502 DGLINNSNDDNLQTIFSDVCP-PNEDDILSCLG--VCSD 537


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