BLASTX nr result

ID: Cnidium21_contig00044159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044159
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    93   3e-17
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi...    86   2e-15
ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycin...    83   2e-14
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
gb|ABK24023.1| unknown [Picea sitchensis]                              82   4e-14

>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = -2

Query: 169 VAEVIKVNDSQENSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTG 2
           V E  +++DSQEN D S KVYVGGIPYYS E+DIRS+F+SCGTITEVDCM FP++G
Sbjct: 165 VKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESG 220


>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
           gi|223528378|gb|EEF30417.1| Protein gar2, putative
           [Ricinus communis]
          Length = 436

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = -2

Query: 181 AEDRVAEVIKVNDSQENSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTG 2
           A++   E   +++SQ + D +TKVYVGGIPYYS EEDIRS+FE CGTITEVDCM FPD+G
Sbjct: 160 AKEVAEETNIISESQISEDSATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSG 219


>ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
          Length = 394

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 5/59 (8%)
 Frame = -2

Query: 163 EVIKVND--SQENSDV---STKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTG 2
           E+ K N   SQ+N D    +TK+YVGGIPYYS E+DIRS+FESCGTITEVDCM FP+TG
Sbjct: 129 ELTKTNTTTSQDNGDAPNTNTKIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETG 187


>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/57 (66%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
 Frame = -2

Query: 169 VAEVIKV-NDSQENSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTG 2
           V E  KV  +S+ + D++ +VYVGGIPYYS E+DIRSFFE CGTITEVDCM FPD+G
Sbjct: 177 VVEAAKVAGESKISEDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSG 233


>gb|ABK24023.1| unknown [Picea sitchensis]
          Length = 302

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = -2

Query: 142 SQENSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTG 2
           SQE++    KVYVGGIPYYSNE+DIRSFFE CGT+TEVDCM FPD+G
Sbjct: 68  SQESNYDECKVYVGGIPYYSNEDDIRSFFEGCGTVTEVDCMTFPDSG 114


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