BLASTX nr result
ID: Cnidium21_contig00044144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00044144
(550 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27138.3| unnamed protein product [Vitis vinifera] 276 1e-72
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra... 264 6e-69
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei... 264 6e-69
ref|XP_002527141.1| protein binding protein, putative [Ricinus c... 263 2e-68
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ... 261 5e-68
>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
Length = 3960
Score = 276 bits (707), Expect = 1e-72
Identities = 134/150 (89%), Positives = 142/150 (94%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHG +SLLS+KL Q
Sbjct: 21 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGSESLLSEKLAQ 80
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGPALLA+NNA FTE+DF SISRIGGS K G AWKTGRFGVGFNSVYHLTDLPSFVSGK
Sbjct: 81 WQGPALLAYNNAEFTEEDFVSISRIGGSNKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGK 140
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEFVSTS 549
Y+V+FDPQG YLPNVSTANPGKRIE+VS+S
Sbjct: 141 YVVLFDPQGVYLPNVSTANPGKRIEYVSSS 170
Score = 97.8 bits (242), Expect = 1e-18
Identities = 52/128 (40%), Positives = 74/128 (57%)
Frame = +1
Query: 157 GTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQWQGPALLAFNNAVFTEDDF 336
G +L EL+QNA+DAGA++V LD+ +G S+LS ++ WQGPAL FN++VF+ D
Sbjct: 932 GPGILFELVQNAEDAGASEVIFLLDKTQYGTSSILSPEMADWQGPALYCFNDSVFSPQDL 991
Query: 337 ASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGKYMVMFDPQGDYLPNVSTAN 516
+ISRI D+P+FVSG+ +VMFDP LP +S ++
Sbjct: 992 YAISRI--------------------------DIPTFVSGENIVMFDPHACNLPGISPSH 1025
Query: 517 PGKRIEFV 540
PG RI +V
Sbjct: 1026 PGLRIRYV 1033
Score = 78.2 bits (191), Expect = 8e-13
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +1
Query: 124 RIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQWQGPALLA 303
+I E+L++Y + +L +L++ AD A K+ L D+R H SLL L ++QGPAL+A
Sbjct: 2158 KISELLVSYGDRDFLLFDLLELADCCKAKKLHLIFDKREHPRQSLLQHNLGEFQGPALVA 2217
Query: 304 F-NNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGKYMVMFDP 480
A + ++ +S+ + +G T +G+G S Y ++DLPS VSG Y +FDP
Sbjct: 2218 IMEGASLSREEVSSLQLLPPWRLRGD---TLNYGLGLLSCYSISDLPSIVSGGYFYIFDP 2274
Query: 481 QGDYLPNVSTANPGKRI 531
G LP S+ P ++
Sbjct: 2275 HGLALPGSSSHGPTAKV 2291
>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317873|gb|EFH48295.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 4711
Score = 264 bits (675), Expect = 6e-69
Identities = 127/150 (84%), Positives = 138/150 (92%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKV LCLDRRVHG SLLS L Q
Sbjct: 10 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSLLSDSLAQ 69
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGP+LLA+N+AVFTE+DF SISRIGGSGK G AWKTGRFGVGFNSVYHLTD+PSFVSGK
Sbjct: 70 WQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNSVYHLTDIPSFVSGK 129
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEFVSTS 549
Y+V+FDPQG YLPN+S ANPGKRI++V +S
Sbjct: 130 YVVLFDPQGAYLPNISAANPGKRIDYVGSS 159
Score = 158 bits (399), Expect = 6e-37
Identities = 75/146 (51%), Positives = 102/146 (69%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQ LT R++ +L Y +G +L EL+QNA+DAGA++V LD+ +G SLLS ++
Sbjct: 1382 GQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPEMAD 1441
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGPAL FNN+VFT+ D +ISRIG + K + GRFG+GFN VYH TD+P FVSG+
Sbjct: 1442 WQGPALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFNCVYHFTDIPGFVSGE 1501
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEF 537
+VMFDP ++LP +S +PG RI+F
Sbjct: 1502 NIVMFDPHANHLPGISPTHPGLRIKF 1527
Score = 70.1 bits (170), Expect = 2e-10
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Frame = +1
Query: 124 RIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQWQGPALLA 303
+++E+L Y +L +L++ AD K+ + D+R H +LL L ++QGPAL+A
Sbjct: 2783 KLKELLSLYASKDFLLFDLLELADCCRVKKLHIIFDKREHSRKTLLQHNLGEFQGPALVA 2842
Query: 304 FNNAV-FTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGKYMVMFDP 480
V T ++ S+ + +G +T +G+G S Y + DL S VSG Y MFDP
Sbjct: 2843 ILEGVTLTREEVCSLQLLSQWRIKG---ETLNYGLGLLSCYFMCDLLSIVSGGYFYMFDP 2899
Query: 481 QGDYLPNVSTANPGKRI 531
QG L +T P ++
Sbjct: 2900 QGATLSAPTTQAPAAKM 2916
>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
product [Arabidopsis thaliana]
gi|332005740|gb|AED93123.1| C3HC4-type RING finger
domain-containing protein [Arabidopsis thaliana]
Length = 4706
Score = 264 bits (675), Expect = 6e-69
Identities = 127/150 (84%), Positives = 138/150 (92%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKV LCLDRRVHG SLLS L Q
Sbjct: 10 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSLLSDSLAQ 69
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGP+LLA+N+AVFTE+DF SISRIGGSGK G AWKTGRFGVGFNSVYHLTD+PSFVSGK
Sbjct: 70 WQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNSVYHLTDIPSFVSGK 129
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEFVSTS 549
Y+V+FDPQG YLPN+S ANPGKRI++V +S
Sbjct: 130 YVVLFDPQGAYLPNISAANPGKRIDYVGSS 159
Score = 158 bits (399), Expect = 6e-37
Identities = 75/146 (51%), Positives = 102/146 (69%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQ LT R++ +L Y +G +L EL+QNA+DAGA++V LD+ +G SLLS ++
Sbjct: 1382 GQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPEMAD 1441
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGPAL FNN+VFT+ D +ISRIG + K + GRFG+GFN VYH TD+P FVSG+
Sbjct: 1442 WQGPALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFNCVYHFTDIPGFVSGE 1501
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEF 537
+VMFDP ++LP +S +PG RI+F
Sbjct: 1502 NIVMFDPHANHLPGISPTHPGLRIKF 1527
Score = 70.9 bits (172), Expect = 1e-10
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Frame = +1
Query: 124 RIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQWQGPALLA 303
+++E+L Y +L +L++ AD K+ + D+R H +LL L ++QGPA++A
Sbjct: 2783 KLKELLSLYASKDFLLFDLLELADCCKVKKLHIIFDKREHPRKTLLQHNLGEFQGPAIVA 2842
Query: 304 FNNAV-FTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGKYMVMFDP 480
V T ++ S+ + +G +T +G+G S Y + DL S VSG Y MFDP
Sbjct: 2843 ILEGVTLTREEICSLQLLSQWRIKG---ETLNYGLGLLSCYFMCDLLSIVSGGYFYMFDP 2899
Query: 481 QGDYLPNVSTANP-GKRIEFVSTS 549
QG L +T P GK + T+
Sbjct: 2900 QGATLSASTTQAPAGKMFSLIGTN 2923
>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
gi|223533501|gb|EEF35243.1| protein binding protein,
putative [Ricinus communis]
Length = 4704
Score = 263 bits (671), Expect = 2e-68
Identities = 127/150 (84%), Positives = 139/150 (92%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKV LCLDRR+H DS++S L Q
Sbjct: 18 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRLHRSDSIISTSLSQ 77
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGPALLA+N+AVFTE+DF SISRIGGS K G AWKTGRFGVGFNSVYHLTDLPSFVSGK
Sbjct: 78 WQGPALLAYNDAVFTEEDFVSISRIGGSAKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGK 137
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEFVSTS 549
Y+V+FDPQG +LPNVST+NPGKRI+FVS+S
Sbjct: 138 YIVLFDPQGVHLPNVSTSNPGKRIDFVSSS 167
Score = 149 bits (375), Expect = 4e-34
Identities = 72/146 (49%), Positives = 99/146 (67%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQ LT R++ +L Y +G +L EL+QNA+DAGA++V LD+ +G S+LS ++
Sbjct: 1388 GQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVIFLLDKTQYGTSSVLSPEMAD 1447
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGPAL FN++VF+ D +ISRIG K GRFG+GFN VYH TD+P+FVSG+
Sbjct: 1448 WQGPALYCFNDSVFSPQDLYAISRIGQESKLEKPLAIGRFGLGFNCVYHFTDIPTFVSGE 1507
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEF 537
+VMFDP LP +S ++PG RI+F
Sbjct: 1508 NIVMFDPHACNLPGISPSHPGLRIKF 1533
Score = 68.9 bits (167), Expect = 5e-10
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Frame = +1
Query: 124 RIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQWQGPALLA 303
+I E+L Y +L +L++ AD A K+ L D+R H SLL + L ++QGPAL+A
Sbjct: 2806 KINELLALYGNSDFLLFDLLELADCCKAKKLHLIFDKREHPRQSLLQQNLGEFQGPALVA 2865
Query: 304 FNNAV-FTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGKYMVMFDP 480
V +D +S+ + +G+ T +G+G S Y + DL S +SG Y MFDP
Sbjct: 2866 ILEGVSLNREDVSSLQLLPPWRLRGN---TLNYGLGLLSCYFICDLLSVISGGYFYMFDP 2922
Query: 481 QGDYLPNVSTANPGKRI 531
G L S+ P ++
Sbjct: 2923 CGLALGVPSSHTPAAKM 2939
>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
Length = 3586
Score = 261 bits (667), Expect = 5e-68
Identities = 126/150 (84%), Positives = 137/150 (91%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQKVDLTRRIREVLLNYPEGTTVLKEL+QNADDAGATKVCLCLDRRVHG +SLLS L
Sbjct: 17 GQKVDLTRRIREVLLNYPEGTTVLKELVQNADDAGATKVCLCLDRRVHGRESLLSASLAP 76
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
+QGPALLA+NNAVFTE+DF SISRIGGS K G AWKTGRFGVGFNSVYHLT+LPSFVSGK
Sbjct: 77 FQGPALLAYNNAVFTEEDFVSISRIGGSNKHGQAWKTGRFGVGFNSVYHLTELPSFVSGK 136
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEFVSTS 549
Y+VMFDPQG YLP VS +NPGKRI+F+ +S
Sbjct: 137 YVVMFDPQGIYLPKVSASNPGKRIDFIRSS 166
Score = 146 bits (368), Expect = 2e-33
Identities = 70/146 (47%), Positives = 99/146 (67%)
Frame = +1
Query: 100 GQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQ 279
GQ LT R+R +L Y +G +L ELIQNA+DAG+++V LD+ +G S+LS ++
Sbjct: 1389 GQHEALTNRLRHILDMYADGPGILFELIQNAEDAGSSEVIFLLDKTHYGTSSVLSPEMAD 1448
Query: 280 WQGPALLAFNNAVFTEDDFASISRIGGSGKQGHAWKTGRFGVGFNSVYHLTDLPSFVSGK 459
WQGPAL +N++VF+ D +ISR+G K GRFG+GFN VYH TD+P+FVSG+
Sbjct: 1449 WQGPALYCYNDSVFSPQDLYAISRVGQESKLQKPLSIGRFGLGFNCVYHFTDVPTFVSGE 1508
Query: 460 YMVMFDPQGDYLPNVSTANPGKRIEF 537
+VMFDP LP +S ++PG RI++
Sbjct: 1509 NIVMFDPHACNLPGISPSHPGLRIKY 1534
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Frame = +1
Query: 175 ELIQNADDAGATKVCLCLDRRVHGVDSLLSKKLQQWQGPALLA-FNNAVFTEDDFASISR 351
+L++ AD A + L D+R H SLL L ++QGPAL+A F + + ++ +S+
Sbjct: 2824 DLLELADCCRAKNLRLIFDKREHPRQSLLQHNLGEFQGPALVAIFEGSSLSTEEISSL-- 2881
Query: 352 IGGSGKQGHAWK----TGRFGVGFNSVYHLTDLPSFVSGKYMVMFDPQGDYLPNVSTANP 519
+ WK T +G+G S Y++ DL S +SG Y +FDP+G L + P
Sbjct: 2882 -----QFRPPWKLRGDTLNYGLGLLSCYYVCDLLSIISGGYFYIFDPRGIALSVAPKSAP 2936
Query: 520 GKRI 531
G ++
Sbjct: 2937 GAKV 2940