BLASTX nr result

ID: Cnidium21_contig00044124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044124
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   275   2e-72
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   271   3e-71
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              271   3e-71
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr...   264   6e-69
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   261   3e-68

>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  275 bits (704), Expect = 2e-72
 Identities = 137/170 (80%), Positives = 153/170 (90%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3   RSRKRETDMSPPSRNDMNTFRRSQVPQVVDTLWQLETRDMLPAVWFIFSRKGCDAAVQYI 182
           +SRKRE D+ P S+ND+N  RRSQVPQ++DTLW L+ RDMLPAVWFIFSRKGCDAAVQY+
Sbjct: 386 KSRKRENDVRPLSKNDINNIRRSQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYL 445

Query: 183 EDC-LLDENEKAEVELALKRLRAKYPDAVRESSVKGLLRGVAAHHAGCLPLWKSFVEELF 359
           EDC LLDE E +EVELALKR R +YPDAVR S+VKGL RGVAAHHAGCLPLWKSF+EELF
Sbjct: 446 EDCRLLDECETSEVELALKRFRIQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELF 505

Query: 360 QRGLVKVVFATETLAAGINMPARTAVVSSLSKRIESGRTQLTANELLQMA 509
           QRGLVKVVFATETLAAGINMPARTAV+SSLSKR +SG  QL++NELLQMA
Sbjct: 506 QRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGLVQLSSNELLQMA 555


>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  271 bits (694), Expect = 3e-71
 Identities = 138/179 (77%), Positives = 157/179 (87%), Gaps = 12/179 (6%)
 Frame = +3

Query: 9   RKRETDMSPPS-----------RNDMNTFRRSQVPQVVDTLWQLETRDMLPAVWFIFSRK 155
           +KRE+DMS  S           +ND+NT RRSQVPQV+DTLW L+ RDMLPA+WFIFSRK
Sbjct: 391 KKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRK 450

Query: 156 GCDAAVQYIEDC-LLDENEKAEVELALKRLRAKYPDAVRESSVKGLLRGVAAHHAGCLPL 332
           GCDA+VQY+EDC LLDE+E +EV+LALKR R +YPDAVRES+VKGLL+GVAAHHAGCLPL
Sbjct: 451 GCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPL 510

Query: 333 WKSFVEELFQRGLVKVVFATETLAAGINMPARTAVVSSLSKRIESGRTQLTANELLQMA 509
           WKSF+EELFQRGLVKVVFATETLAAGINMPARTAV+SSLSKR ESGR QL++NELLQMA
Sbjct: 511 WKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGESGRIQLSSNELLQMA 569


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  271 bits (694), Expect = 3e-71
 Identities = 138/179 (77%), Positives = 157/179 (87%), Gaps = 12/179 (6%)
 Frame = +3

Query: 9   RKRETDMSPPS-----------RNDMNTFRRSQVPQVVDTLWQLETRDMLPAVWFIFSRK 155
           +KRE+DMS  S           +ND+NT RRSQVPQV+DTLW L+ RDMLPA+WFIFSRK
Sbjct: 281 KKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRK 340

Query: 156 GCDAAVQYIEDC-LLDENEKAEVELALKRLRAKYPDAVRESSVKGLLRGVAAHHAGCLPL 332
           GCDA+VQY+EDC LLDE+E +EV+LALKR R +YPDAVRES+VKGLL+GVAAHHAGCLPL
Sbjct: 341 GCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPL 400

Query: 333 WKSFVEELFQRGLVKVVFATETLAAGINMPARTAVVSSLSKRIESGRTQLTANELLQMA 509
           WKSF+EELFQRGLVKVVFATETLAAGINMPARTAV+SSLSKR ESGR QL++NELLQMA
Sbjct: 401 WKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGESGRIQLSSNELLQMA 459


>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
           gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
           DOB1 [Medicago truncatula]
          Length = 1201

 Score =  264 bits (674), Expect = 6e-69
 Identities = 129/158 (81%), Positives = 147/158 (93%), Gaps = 1/158 (0%)
 Frame = +3

Query: 39  SRNDMNTFRRSQVPQVVDTLWQLETRDMLPAVWFIFSRKGCDAAVQYIEDC-LLDENEKA 215
           S+ND+N  RRSQVPQ++DTLW L++RDMLPAVWFIFSRKGCDAAVQY+EDC LLDE E +
Sbjct: 435 SKNDINAIRRSQVPQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLDECEAS 494

Query: 216 EVELALKRLRAKYPDAVRESSVKGLLRGVAAHHAGCLPLWKSFVEELFQRGLVKVVFATE 395
           EV LALKR R +YPDAVRE++VKGLL+GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATE
Sbjct: 495 EVLLALKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATE 554

Query: 396 TLAAGINMPARTAVVSSLSKRIESGRTQLTANELLQMA 509
           TLAAGINMPARTAV+SSLSKR ++GRT LT+NELLQMA
Sbjct: 555 TLAAGINMPARTAVISSLSKRSDTGRTLLTSNELLQMA 592


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Glycine max]
          Length = 1162

 Score =  261 bits (668), Expect = 3e-68
 Identities = 128/158 (81%), Positives = 147/158 (93%), Gaps = 1/158 (0%)
 Frame = +3

Query: 39  SRNDMNTFRRSQVPQVVDTLWQLETRDMLPAVWFIFSRKGCDAAVQYIEDC-LLDENEKA 215
           S+N++N  RRSQVPQV+DTLWQL++RDMLPA+WFIFSRKGCDAAVQY+E+C LLDE E +
Sbjct: 401 SKNNINAIRRSQVPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESS 460

Query: 216 EVELALKRLRAKYPDAVRESSVKGLLRGVAAHHAGCLPLWKSFVEELFQRGLVKVVFATE 395
           EVELALKR R +YPDAVRES+V+GLL GVAAHHAGCLPLWK+F+EELFQRGLVKVVFATE
Sbjct: 461 EVELALKRFRKQYPDAVRESAVRGLLEGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATE 520

Query: 396 TLAAGINMPARTAVVSSLSKRIESGRTQLTANELLQMA 509
           TLAAGINMPARTAV+SSLSKR +SGR  L++NELLQMA
Sbjct: 521 TLAAGINMPARTAVISSLSKRGDSGRIPLSSNELLQMA 558


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