BLASTX nr result

ID: Cnidium21_contig00044111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044111
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892609.1| predicted protein [Arabidopsis lyrata subsp....    63   2e-08
ref|XP_002886692.1| predicted protein [Arabidopsis lyrata subsp....    63   2e-08
emb|CBI24373.3| unnamed protein product [Vitis vinifera]               62   4e-08
gb|ABW24143.1| LOV1 [Arabidopsis thaliana] gi|158253363|gb|ABW24...    62   4e-08
gb|AAV88068.1| NBS-LRR protein [Ipomoea batatas]                       62   4e-08

>ref|XP_002892609.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338451|gb|EFH68868.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 885

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/75 (41%), Positives = 49/75 (65%)
 Frame = -3

Query: 302 VGLEVDVQNLSRTLIHDEHNKLILIVGEKGIGKTTLAMEVYQNNMVCHHFQVCAWVNLSR 123
           VG+E  V+ L   L+ +++ +++ I G  GIGKTTLA +V+ ++MV  HF   AWV +S+
Sbjct: 166 VGVEQSVEELVSHLVENDNTQVVSISGMGGIGKTTLARQVFHHDMVRCHFDGFAWVCVSQ 225

Query: 122 SFVRREVLQNIFKEI 78
            F R+ V Q I +E+
Sbjct: 226 EFTRKHVWQRILQEL 240


>ref|XP_002886692.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332533|gb|EFH62951.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 944

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = -3

Query: 302 VGLEVDVQNLSRTLIHDEHNKLILIVGEKGIGKTTLAMEVYQNNMVCHHFQVCAWVNLSR 123
           VGLE  V+ L    + +++ +++ I G  G+GKTTLA +V+ + MV H F   AWV +S+
Sbjct: 165 VGLETKVKKLVGYFVEEDNIQVVSITGMGGVGKTTLARQVFHHEMVKHKFDGLAWVPVSQ 224

Query: 122 SFVRREVLQNIFKEIPQEFLAEKI 51
            F R+ + Q I +E+       KI
Sbjct: 225 EFTRKHLWQTILRELKPHVEKNKI 248


>emb|CBI24373.3| unnamed protein product [Vitis vinifera]
          Length = 556

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 302 VGLEVDVQNLSRTLIHDEHNKLIL-IVGEKGIGKTTLAMEVYQNNMVCHHFQVCAWVNLS 126
           VG+E     L + L+     + ++ +VG  G+GKTTLA +VY N  +  HF   AW+ +S
Sbjct: 109 VGIESHKGELIKWLVEGAPERTVISVVGMGGLGKTTLAKKVYDNKRMVEHFDCRAWITVS 168

Query: 125 RSFVRREVLQNIFKEIPQEFLAEKIDY 45
           +SF   EVL+N+ K   Q +LA K +Y
Sbjct: 169 QSFKMEEVLRNVIK---QFYLARKEEY 192


>gb|ABW24143.1| LOV1 [Arabidopsis thaliana] gi|158253363|gb|ABW24152.1| LOV1
           [Arabidopsis thaliana] gi|158253369|gb|ABW24155.1| LOV1
           [Arabidopsis thaliana]
          Length = 910

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/75 (40%), Positives = 52/75 (69%)
 Frame = -3

Query: 302 VGLEVDVQNLSRTLIHDEHNKLILIVGEKGIGKTTLAMEVYQNNMVCHHFQVCAWVNLSR 123
           VG+E  V+ L+  L+ +++ +++ I G  GIGKTTLA +V+ ++MV  HF   AWV +S+
Sbjct: 166 VGVEQSVEALAGHLVENDNIQVVSISGMGGIGKTTLARQVFHHDMVQRHFDGFAWVFVSQ 225

Query: 122 SFVRREVLQNIFKEI 78
            F ++ V Q+I++E+
Sbjct: 226 QFTQKHVWQSIWQEL 240


>gb|AAV88068.1| NBS-LRR protein [Ipomoea batatas]
          Length = 849

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -3

Query: 308 RRVGLEVDVQNLSRTLIHDEHNKLILIVGEKGIGKTTLAMEVYQNNMVCHHFQVCAWVNL 129
           R VG   D   +   L++ +  ++ILIVG  GIGKTTLA  VY+++ V  HF V AW+ +
Sbjct: 144 RMVGRRNDYLLVKNQLLYSDQRRVILIVGMNGIGKTTLAASVYEDSSVASHFDVRAWITM 203

Query: 128 SRSFVRREVLQNI 90
           S  +  R+ L ++
Sbjct: 204 SGEYTMRQTLHDL 216


Top