BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044063
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01934.1| hypothetical protein [Beta vulgaris]                   160   8e-38
pir||C85079 hypothetical protein AT4g08050 [imported] - Arabidop...   122   2e-26
dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis t...   121   7e-26
emb|CAB81134.1| putative athila transposon protein [Arabidopsis ...   121   7e-26
gb|AAD19759.1| putative Athila retroelement ORF1 protein [Arabid...   120   1e-25

>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/143 (55%), Positives = 101/143 (70%), Gaps = 2/143 (1%)
 Frame = +1

Query: 1   SPSGVPTGLTMPDIQAANFEIKPALLTMIQHNQFAGLPSEDLTNHLQRFQQLCSTIKHQG 180
           SP  VPTG+ MP I A NFEIK  +L M+Q+NQFAGLPSED   HLQRF Q C+T K  G
Sbjct: 16  SPDNVPTGVPMPTIAATNFEIKSHVLNMVQNNQFAGLPSEDPNQHLQRFLQCCATQKQAG 75

Query: 181 VTPDQLRVMLFGFSLRDKAQKWLNDI--DLTEWDEIAQAFLTEFFPPNRTDDLIDKMTGF 354
           VTPD+++++LFGFSLRDKA    N +   +T W E+ + FL +++P  +T D+   +  F
Sbjct: 76  VTPDEMKLLLFGFSLRDKALFCYNKLPSTITTWPELFKIFLIKWYPYQKTADMRHAIVTF 135

Query: 355 KQEYGESLRDAWERFKDLQRACP 423
            Q+ GESL +AWERFKDLQR CP
Sbjct: 136 TQDPGESLYEAWERFKDLQRLCP 158


>pir||C85079 hypothetical protein AT4g08050 [imported] - Arabidopsis thaliana
           gi|5724774|gb|AAD48078.1|AF160183_5 contains similarity
           to retrotransposons; may be a pseudogene [Arabidopsis
           thaliana] gi|7267445|emb|CAB81142.1| AT4g08050
           [Arabidopsis thaliana]
          Length = 1428

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/137 (46%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
 Frame = +1

Query: 22  GLTMPDIQAANFEIKPALLTMIQHNQFAGLPSEDLTNHLQRFQQLCSTIKHQGVTPDQLR 201
           G+  P IQ  NFEIK  L++MIQ N+F GLP ED  +HL  F +LC+  K  GV+ D  +
Sbjct: 28  GIAPPAIQNNNFEIKSGLISMIQGNKFHGLPMEDPLDHLDEFDRLCNLTKINGVSEDGFK 87

Query: 202 VMLFGFSLRDKAQKW---LNDIDLTEWDEIAQAFLTEFFPPNRTDDLIDKMTGFKQEYGE 372
           + LF FSL DKA  W   L+   +T WD+  +AFL++FF   RT  L +++ GF Q+ GE
Sbjct: 88  LRLFPFSLGDKAHIWEKNLSHDSITTWDDYKKAFLSKFFSNARTARLRNEIYGFSQKTGE 147

Query: 373 SLRDAWERFKDLQRACP 423
           S  +AWERFK     CP
Sbjct: 148 SFCEAWERFKGYTNQCP 164


>dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1864

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/137 (43%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
 Frame = +1

Query: 22  GLTMPDIQAANFEIKPALLTMIQHNQFAGLPSEDLTNHLQRFQQLCSTIKHQGVTPDQLR 201
           G+  P +Q  NFEIK  L+ M+Q N+F GLP ED  +HL  F +LCS  K  GV+ D  +
Sbjct: 60  GIVPPPVQNNNFEIKSGLIAMVQSNKFHGLPMEDPLDHLDEFDRLCSLTKINGVSEDGFK 119

Query: 202 VMLFGFSLRDKAQKWLNDI---DLTEWDEIAQAFLTEFFPPNRTDDLIDKMTGFKQEYGE 372
           + LF FSL DKA +W   +    +T W++  +AFL +FF  +RT  L + ++GF Q   E
Sbjct: 120 LRLFPFSLGDKAHQWEKSLLQGSITSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNE 179

Query: 373 SLRDAWERFKDLQRACP 423
           +  +AWERFK  Q  CP
Sbjct: 180 TFCEAWERFKGYQTQCP 196


>emb|CAB81134.1| putative athila transposon protein [Arabidopsis thaliana]
          Length = 866

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/137 (45%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
 Frame = +1

Query: 22  GLTMPDIQAANFEIKPALLTMIQHNQFAGLPSEDLTNHLQRFQQLCSTIKHQGVTPDQLR 201
           G+  P IQ  NFEIK  L++MIQ N+F GLP ED  +HL  F +LC+  K  GV+ D  +
Sbjct: 28  GIAPPAIQNNNFEIKSGLISMIQGNKFYGLPMEDPLDHLDEFDRLCNLTKINGVSADGFK 87

Query: 202 VMLFGFSLRDKAQKWLNDI---DLTEWDEIAQAFLTEFFPPNRTDDLIDKMTGFKQEYGE 372
           + LF FSL DKA  W  ++    +  WD+  +AFL++FF   RT  L ++++GF Q+ GE
Sbjct: 88  LRLFPFSLGDKAHIWEKNLPHDSIITWDDCKKAFLSKFFSNARTARLRNEISGFSQKTGE 147

Query: 373 SLRDAWERFKDLQRACP 423
           S  +AWERFK     CP
Sbjct: 148 SFCEAWERFKGYTNQCP 164


>gb|AAD19759.1| putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
          Length = 750

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/137 (43%), Positives = 82/137 (59%), Gaps = 3/137 (2%)
 Frame = +1

Query: 22  GLTMPDIQAANFEIKPALLTMIQHNQFAGLPSEDLTNHLQRFQQLCSTIKHQGVTPDQLR 201
           G+ +P +Q  NFEIK  L+ M+Q N+F GLP ED  +HL  F++LC   K  GV+ D  +
Sbjct: 28  GIVLPLVQNNNFEIKSGLIAMVQGNKFHGLPMEDSLDHLDEFERLCDLTKINGVSEDGFK 87

Query: 202 VMLFGFSLRDKAQKW---LNDIDLTEWDEIAQAFLTEFFPPNRTDDLIDKMTGFKQEYGE 372
             LF FSL DK   W   L    +T WD+  +AF  +FF  +RT  L ++++GF Q+  E
Sbjct: 88  FRLFPFSLGDKTHLWEKTLPQNSITTWDDCKKAFFAKFFSNSRTARLRNEISGFTQKQNE 147

Query: 373 SLRDAWERFKDLQRACP 423
           S  +AWERFK  Q  CP
Sbjct: 148 SFCEAWERFKGYQTKCP 164