BLASTX nr result

ID: Cnidium21_contig00044060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044060
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331526.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002523421.1| hypothetical protein RCOM_0344380 [Ricinus c...   107   8e-22
ref|XP_003610485.1| hypothetical protein MTR_4g132740 [Medicago ...   103   2e-20
ref|XP_002874793.1| hypothetical protein ARALYDRAFT_911683 [Arab...    81   1e-13
gb|AAC28202.1| T24H24.4 gene product [Arabidopsis thaliana] gi|7...    64   2e-08

>ref|XP_002331526.1| predicted protein [Populus trichocarpa] gi|222873750|gb|EEF10881.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/121 (61%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +3

Query: 18  MQGSREPKKQKLRPKGCMKALCCSCRLSVSSWEEGEGAKLDRSTTISSEAHTMVQDKLDQ 197
           M+ SR  KKQKL+ +GC KA CCSCRLSVSS EE E +  DR  +ISS AH MVQ++LDQ
Sbjct: 1   MKESRVDKKQKLQQRGC-KAFCCSCRLSVSSSEEAESSNPDRFASISSLAHAMVQERLDQ 59

Query: 198 MIXXXXXXXXXXXXXS-RSDGTKFVVMVATEKSSYDPREDFTESVVEMITTNRIYEPKDL 374
           MI               RSDGTKF+VMVA EKSSYDPREDF ES+VEMI  NR+ EPKDL
Sbjct: 60  MIRERQEARQRERRRRLRSDGTKFIVMVAMEKSSYDPREDFRESMVEMIMANRLQEPKDL 119

Query: 375 K 377
           +
Sbjct: 120 R 120


>ref|XP_002523421.1| hypothetical protein RCOM_0344380 [Ricinus communis]
           gi|223537371|gb|EEF39000.1| hypothetical protein
           RCOM_0344380 [Ricinus communis]
          Length = 156

 Score =  107 bits (268), Expect = 8e-22
 Identities = 66/120 (55%), Positives = 80/120 (66%), Gaps = 7/120 (5%)
 Frame = +3

Query: 39  KKQKLRPKGCMKALCCSC--RLSVSSWEEGEGAKLD-RSTTISSEAHTMVQDKLDQMIXX 209
           KKQKL+ +GC KALCCS   RLSVSS EE E +  + R  +ISS AH MVQ++LDQMI  
Sbjct: 2   KKQKLQQRGC-KALCCSSCSRLSVSSSEEAESSDSNHRYASISSLAHAMVQERLDQMIKE 60

Query: 210 XXXXXXXXXXXSR----SDGTKFVVMVATEKSSYDPREDFTESVVEMITTNRIYEPKDLK 377
                       R    ++G KFVVMVA EKSS+DPR+DF ES+VEMI  NR+ EPK L+
Sbjct: 61  RQQQETRYHKERRRARSNEGIKFVVMVAMEKSSHDPRQDFRESMVEMIMANRLEEPKQLR 120


>ref|XP_003610485.1| hypothetical protein MTR_4g132740 [Medicago truncatula]
           gi|355511540|gb|AES92682.1| hypothetical protein
           MTR_4g132740 [Medicago truncatula]
          Length = 150

 Score =  103 bits (256), Expect = 2e-20
 Identities = 61/116 (52%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
 Frame = +3

Query: 42  KQKLRPKGCMKALCCSC-RLSVSSWEEGEGAKL--DRSTTISSEAHTMVQDKLDQMIXXX 212
           K   + +GC KALCCS  R SVSS EE E +    DR  ++S+ AH MVQ++LDQMI   
Sbjct: 2   KTSKQQRGC-KALCCSSNRFSVSSSEEAESSSSASDRFPSVSTLAHAMVQERLDQMIREK 60

Query: 213 XXXXXXXXXXS-RSDGTKFVVMVATEKSSYDPREDFTESVVEMITTNRIYEPKDLK 377
                       R +GTKFVVM+ATEK SYDPREDF ES++EMIT NR+ + KDL+
Sbjct: 61  LEARHVERKREKRREGTKFVVMLATEKCSYDPREDFRESMMEMITVNRLQDAKDLR 116


>ref|XP_002874793.1| hypothetical protein ARALYDRAFT_911683 [Arabidopsis lyrata subsp.
           lyrata] gi|297320630|gb|EFH51052.1| hypothetical protein
           ARALYDRAFT_911683 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 55/140 (39%), Positives = 77/140 (55%), Gaps = 18/140 (12%)
 Frame = +3

Query: 12  ERMQGSREPKKQKLRPKGCMKALCCS--CRLSVSSWEEGEGAKLDRST----TISSEAHT 173
           E  + +++ + Q   P+ C +ALCC    RLS+SS    E  K  R +    ++SS AH 
Sbjct: 14  ENKKLNKQSQHQTREPRIC-RALCCGNKARLSISSCSSAESDKSSRFSDQHGSLSSLAHY 72

Query: 174 MVQDKLDQMIXXXXXXXXXXXXXS--------RSDG----TKFVVMVATEKSSYDPREDF 317
           MVQ+KL+QMI                      RS+G    TKF+VM+A EK S+DPREDF
Sbjct: 73  MVQEKLEQMIRETQEATHQEKIRQQKMRRRRRRSEGSISSTKFIVMMAMEKCSFDPREDF 132

Query: 318 TESVVEMITTNRIYEPKDLK 377
            +S+VEMI  N+I E  +L+
Sbjct: 133 RDSMVEMIVANKIKEADELR 152


>gb|AAC28202.1| T24H24.4 gene product [Arabidopsis thaliana]
           gi|7267159|emb|CAB77871.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 411

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 12/88 (13%)
 Frame = +3

Query: 150 TISSEAHTMVQDKLDQMIXXXXXXXXXXXXXS--------RSDG----TKFVVMVATEKS 293
           ++SS AH MVQ+KL+QMI                      RS+G    TKF+VM+A EK 
Sbjct: 292 SLSSLAHYMVQEKLEQMIRETQEATHQEKIRQQKMRRRRRRSEGSISSTKFIVMMAMEKC 351

Query: 294 SYDPREDFTESVVEMITTNRIYEPKDLK 377
           S+DPR+DF +S+VEMI  N+I E  +L+
Sbjct: 352 SFDPRKDFRDSMVEMIVANKIKEADELR 379


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