BLASTX nr result

ID: Cnidium21_contig00044015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044015
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...    99   5e-19
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_004173915.1| PREDICTED: uncharacterized protein LOC101225...    90   2e-16
ref|NP_568185.1| Mitochondrial transcription termination factor ...    90   2e-16
ref|XP_004159847.1| PREDICTED: uncharacterized LOC101209015 [Cuc...    89   4e-16

>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/109 (44%), Positives = 68/109 (62%)
 Frame = -3

Query: 371 FTEPQITSLLSKRPSIFSLNEDKIIKPRLDLFTSYGFSSADIHHILVSDIEILKRGIKNQ 192
           FT+ QI+SL+ KRPS+   +    + P+L+ F S G SS+D+   L SD  +L R I+NQ
Sbjct: 81  FTKTQISSLVKKRPSLLLAHAHNTLLPKLEFFYSIGVSSSDLARTLSSDPTLLTRSIENQ 140

Query: 191 IIPCCEFLKSVARDNESFIGIVKRSIWVLKCDYKYNLQPNIEVLRDYGV 45
           I+P   FLKS+   NE  +  +KR+ W+   DY  NL PN+E LR+ GV
Sbjct: 141 IVPSYNFLKSILLSNEKIVSALKRTTWIFLEDYSKNLMPNVERLREIGV 189


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/122 (38%), Positives = 67/122 (54%)
 Frame = -3

Query: 371 FTEPQITSLLSKRPSIFSLNEDKIIKPRLDLFTSYGFSSADIHHILVSDIEILKRGIKNQ 192
           F+  QI+SL+ KRP +   N    + P+LD F S G S   +   L SD  +L R ++NQ
Sbjct: 105 FSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTLSSDPTLLTRSLENQ 164

Query: 191 IIPCCEFLKSVARDNESFIGIVKRSIWVLKCDYKYNLQPNIEVLRDYGVPEYRIERFLRF 12
           I+P   FLK++ R +E  +   KR+ W+   D   NL PN+E+LR  GVP+  I   L  
Sbjct: 165 IVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQSCISLLLTH 224

Query: 11  QP 6
            P
Sbjct: 225 FP 226


>ref|XP_004173915.1| PREDICTED: uncharacterized protein LOC101225589 [Cucumis sativus]
          Length = 359

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/123 (37%), Positives = 74/123 (60%)
 Frame = -3

Query: 371 FTEPQITSLLSKRPSIFSLNEDKIIKPRLDLFTSYGFSSADIHHILVSDIEILKRGIKNQ 192
           F+E QI+ L ++ P I S N +K + P+L  F S   SS++I  IL SD  +L + +  +
Sbjct: 65  FSESQISYLANRYPPILSSNPEKTLLPKLLFFQSKAHSSSEIFEILRSDPWVLSKSLNER 124

Query: 191 IIPCCEFLKSVARDNESFIGIVKRSIWVLKCDYKYNLQPNIEVLRDYGVPEYRIERFLRF 12
           IIP   +L++V    E  +  +K S+ +L  D +  L PNIE+L+  GVP+  I ++L++
Sbjct: 125 IIPAFNYLQAVLGSEEKTLATIKHSVSILSKDLRICLGPNIEILKQIGVPDSNILKYLQY 184

Query: 11  QPR 3
           QPR
Sbjct: 185 QPR 187


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/122 (39%), Positives = 68/122 (55%)
 Frame = -3

Query: 371 FTEPQITSLLSKRPSIFSLNEDKIIKPRLDLFTSYGFSSADIHHILVSDIEILKRGIKNQ 192
           FT  QI+SL+ KRP +   N + ++ P+L  F S G S + +   L SD  IL R + NQ
Sbjct: 113 FTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQ 172

Query: 191 IIPCCEFLKSVARDNESFIGIVKRSIWVLKCDYKYNLQPNIEVLRDYGVPEYRIERFLRF 12
           +IP   FLKSV   +E  +  ++R+ WV   D+  NL PNI  + + GVPE  I+  L  
Sbjct: 173 LIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTH 232

Query: 11  QP 6
            P
Sbjct: 233 FP 234


>ref|XP_004159847.1| PREDICTED: uncharacterized LOC101209015 [Cucumis sativus]
          Length = 365

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/123 (34%), Positives = 76/123 (61%)
 Frame = -3

Query: 371 FTEPQITSLLSKRPSIFSLNEDKIIKPRLDLFTSYGFSSADIHHILVSDIEILKRGIKNQ 192
           F++ QI+ ++ + P I S N +K + P+L  F S GFSS +I   L S+   L+  +  +
Sbjct: 71  FSQSQISDVVKRYPGILSANPEKTLLPKLSFFQSKGFSSPEIVKFLRSNPWSLRASLNKR 130

Query: 191 IIPCCEFLKSVARDNESFIGIVKRSIWVLKCDYKYNLQPNIEVLRDYGVPEYRIERFLRF 12
           IIP  +++++V    E  + ++K+ + +L  D + ++ PNIE+L+  GVP+  I R+L++
Sbjct: 131 IIPAFDYIQAVFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVPDSNILRYLQY 190

Query: 11  QPR 3
           QPR
Sbjct: 191 QPR 193


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