BLASTX nr result

ID: Cnidium21_contig00044009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044009
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [...    81   1e-13
emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]    81   1e-13
gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca...    73   3e-11
gb|ACZ64258.1| RPM1 interacting protein 4 transcript 2a [Lactuca...    71   8e-11
gb|ACZ64255.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...    71   8e-11

>ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
          Length = 261

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 7/101 (6%)
 Frame = +1

Query: 37  SGENKDRKRFTDTPVSNDN---SRGIGSTHHNRRGNGPGSDQPGRQ---NGGSLHSIDRS 198
           S E+ D+K+ TD+P  NDN        STH  + G G  S +  R+   +GGS HSIDRS
Sbjct: 82  SKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRGMNSGETYRKPRTSGGSEHSIDRS 141

Query: 199 PLHPQFQAKRNEKSSGSPARESKRPS-GNSNATPGRSRMKP 318
           PLHP  QA+   + +GSP+ E K  S  +S+ TPGRSRMKP
Sbjct: 142 PLHPHHQARIAGRGTGSPSWEGKGSSYDSSHGTPGRSRMKP 182


>emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]
          Length = 599

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 7/101 (6%)
 Frame = +1

Query: 37  SGENKDRKRFTDTPVSNDN---SRGIGSTHHNRRGNGPGSDQPGRQ---NGGSLHSIDRS 198
           S E+ D+K+ TD+P  NDN        STH  + G G  S +  R+   +GGS HSIDRS
Sbjct: 89  SKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRGMNSGETYRKPRTSGGSEHSIDRS 148

Query: 199 PLHPQFQAKRNEKSSGSPARESKRPS-GNSNATPGRSRMKP 318
           PLHP  QA+   + +GSP+ E K  S  +S+ TPGRSRMKP
Sbjct: 149 PLHPHHQARIAGRGTGSPSWEGKGSSYDSSHGTPGRSRMKP 189


>gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca tatarica]
          Length = 243

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = +1

Query: 76  PVSNDNSRGIGSTHHNRRGNGPGSDQPGRQNGGSLHSIDRSPLHPQFQAK-RNEKSSGSP 252
           P  N + R  G + + R G G  + +P + + GS +S DRSPLHP +QAK    K SGSP
Sbjct: 86  PNDNADRRTSGGSAYQRGGQGTAAGRPVKHSAGSENSFDRSPLHPHYQAKGAAGKGSGSP 145

Query: 253 ARESKRPSGNSNATPGRSRMKPV 321
           A E K    +S+ TP RSRMKPV
Sbjct: 146 AWEGKNSYDSSHGTPSRSRMKPV 168


>gb|ACZ64258.1| RPM1 interacting protein 4 transcript 2a [Lactuca tatarica]
          Length = 243

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 76  PVSNDNSRGIGSTHHNRRGNGPGSDQPGRQNGGSLHSIDRSPLHPQFQAK-RNEKSSGSP 252
           P  N   R  G + + R G G  + +P + + GS +S DRSPLHP +QAK    K SGSP
Sbjct: 86  PNDNAGRRASGGSAYQRGGQGTAAGRPVKHSAGSENSFDRSPLHPHYQAKVAAGKGSGSP 145

Query: 253 ARESKRPSGNSNATPGRSRMKP 318
           A E K    +S  TP RSRMKP
Sbjct: 146 AWEGKNSYDSSQGTPSRSRMKP 167


>gb|ACZ64255.1| RPM1 interacting protein 4 transcript 2 [Lactuca indica]
          Length = 243

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +1

Query: 76  PVSNDNSRGIGSTHHNRRGNGPGSDQPGRQNGGSLHSIDRSPLHPQFQAK-RNEKSSGSP 252
           P  N   R  G + + R G G  + +P + + GS +S DRSPLHP +QAK    K SGSP
Sbjct: 86  PNDNTGRRTSGGSAYQRGGQGTAAGRPVKHSAGSENSFDRSPLHPHYQAKVAAGKGSGSP 145

Query: 253 ARESKRPSGNSNATPGRSRMKP 318
           A E K    +S+ TP RSRMKP
Sbjct: 146 AWEGKNSYDSSHGTPSRSRMKP 167


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