BLASTX nr result

ID: Cnidium21_contig00044003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044003
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    71   1e-10
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    64   1e-08
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    64   1e-08
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    63   2e-08
ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago ...    62   6e-08

>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/94 (40%), Positives = 55/94 (58%)
 Frame = -1

Query: 294 AECLGVREALSWLMSRQERMVMVESDSLLTVKAIQSSKGNLLEVGHVVDQCKTILEGMPG 115
           AE +G+REA+ W++S     V+ E D+ + V A+ S   +L E G V+  C+ +L+    
Sbjct: 221 AEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCN 280

Query: 114 VSVFHIYKQANKVAHGLARLPCSVNSFNIFTSPP 13
            SV  I KQAN VAH LAR     + FN+F+ PP
Sbjct: 281 YSVQFIRKQANLVAHSLARASHLQDGFNMFSVPP 314


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
 Frame = -1

Query: 291  ECLGVREALSWLMSRQERMVMVESDSLLTVKAIQSSKGNLLEVGHVVDQCKTILEGMPGV 112
            E LGVRE LSW+  R    ++VE+D L  V+AIQ         G ++  C  +L+ +  V
Sbjct: 716  EALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDV 775

Query: 111  SVFHIYKQANKVAHGLARLPCSVNSFNIF-TSPPTHLL 1
             V +  + AN  AH LA   CS  S +I+  +PP  +L
Sbjct: 776  QVVYARRSANSAAHCLANGACSFTSLHIWGYTPPQCIL 813


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -1

Query: 291  ECLGVREALSWLMSRQERMVMVESDSLLTVKAIQSSKGNLLEVGHVVDQCKTILEGMPGV 112
            E LGVRE LSW+  R    ++VE+D LL V+AIQ      +  G ++  C  +L+ +  V
Sbjct: 1689 EALGVREVLSWIHERSRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHLVDV 1748

Query: 111  SVFHIYKQANKVAHGLARLPCSVNSFNIF-TSPPTHLL 1
             V +  + AN  AH LA+   S  S +I+  +PP  +L
Sbjct: 1749 QVVYARRSANSAAHCLAKGAGSFTSLHIWGYTPPQCIL 1786


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/106 (32%), Positives = 54/106 (50%)
 Frame = -1

Query: 318 PSPQSVFEAECLGVREALSWLMSRQERMVMVESDSLLTVKAIQSSKGNLLEVGHVVDQCK 139
           P PQ   EAE +G+R+A+ WL   +   V +E D  L V +I     N  E G ++D C+
Sbjct: 105 PPPQ---EAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCR 161

Query: 138 TILEGMPGVSVFHIYKQANKVAHGLARLPCSVNSFNIFTSPPTHLL 1
           ++L+      +  + +QAN VAH  AR+      F +  + P  +L
Sbjct: 162 SLLQQFTNFKISFVRRQANVVAHSFARVSIFQPLFGLAFAKPESIL 207


>ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago truncatula]
           gi|355505768|gb|AES86910.1| hypothetical protein
           MTR_4g016830 [Medicago truncatula]
          Length = 108

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/102 (35%), Positives = 57/102 (55%)
 Frame = -1

Query: 306 SVFEAECLGVREALSWLMSRQERMVMVESDSLLTVKAIQSSKGNLLEVGHVVDQCKTILE 127
           +V EAE   + EA+   +S   + V  E+D +    AI ++  +L EVG ++ QC+ +L 
Sbjct: 2   TVLEAEATALSEAIKLAISLGFQTVRFETDCMTLADAIHTTSAHLNEVGDIISQCRGLLF 61

Query: 126 GMPGVSVFHIYKQANKVAHGLARLPCSVNSFNIFTSPPTHLL 1
                 V +I +QAN+VAH +AR   S  S ++F S P+ LL
Sbjct: 62  TNTDFKVSYIRRQANRVAHSIARASLSHLSPHLFYSVPSTLL 103


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