BLASTX nr result

ID: Cnidium21_contig00043985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043985
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09
ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|2...    66   6e-09
ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus c...    65   1e-08

>ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|222844322|gb|EEE81869.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 66/216 (30%), Positives = 87/216 (40%), Gaps = 56/216 (25%)
 Frame = +3

Query: 12  THSCQRNQSPWDVPTTFSSATVTPFFQVQEIE---SLLENK-------AIKSVASMKLS- 158
           TH CQ NQSPWDV  +FS  T  P     + E   SL  N        A++SVASM +  
Sbjct: 25  THVCQLNQSPWDV-ISFSQETYYPSSSPSQFEGEDSLNGNGSLGDSIGAVESVASMMMED 83

Query: 159 ------LAGRDNNACLYDEEREKEA------------------VNISYCAKTDENGNWIC 266
                 +  + +N  + D+  + E                     +  C KTD  G W C
Sbjct: 84  SEQKGMIKMKVDNMVIIDDNHDNEGNRRSEMLDDYEGMKIDSEFELKNCNKTDGKG-WHC 142

Query: 267 GLEAKEGETFCEFH-----LQSYI--------APLVRPVTKKGT-------SNINQAKK- 383
             E + G   C+ H     L+S          + +      KGT            AKK 
Sbjct: 143 KNETRNGLPMCDHHHHLTSLKSSSCNNGNINGSAIATKKPDKGTCITGARRGRAKSAKKG 202

Query: 384 SKSEFNPYKSLYYYESFGPTWGKRKIARELSKKSED 491
           S S  NPY+  YYY  FGP WGKR+  R+   K+ED
Sbjct: 203 SSSNSNPYE-FYYYSGFGPLWGKRRGDRDAVNKNED 237


>ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|222861585|gb|EEE99127.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 66/224 (29%), Positives = 88/224 (39%), Gaps = 65/224 (29%)
 Frame = +3

Query: 12  THSCQRNQSPWDVPTTFSSATVTP---FFQVQEIESLLEN-------KAIKSVASMKLS- 158
           TH CQ NQSPWDV  +FS  T  P    +Q +  +S   N        A++SVASM +  
Sbjct: 26  THVCQLNQSPWDV-ISFSQETYYPSSSLYQFEGEDSFNGNGSLGDSVGAVESVASMMMED 84

Query: 159 ------LAGRDNNACLYDEEREKEA------------------VNISYCAKTDENGNWIC 266
                 +  + ++  + D+  E E                     +  C KTD  G W C
Sbjct: 85  IEEKGMMKMKVDHMVIVDDNYENEGNKRSEMFGDYEEMKIDSEFKLKKCNKTDGKG-WHC 143

Query: 267 GLEAKEGETFCE--FHLQSYIAPLVRPVTKKGTSNIN----------------------- 371
             + K G T C+   HL S+         K   SNIN                       
Sbjct: 144 KNDTKNGHTVCDHHHHLTSH---------KSSYSNINNNINGSAATKKPDKVASIIGARR 194

Query: 372 ----QAKK-SKSEFNPYKSLYYYESFGPTWGKRKIARELSKKSE 488
                AKK S S  NPY+  YYY  FGP WGKR+  ++   K+E
Sbjct: 195 GRAKSAKKGSSSSSNPYE-FYYYSGFGPLWGKRRGDKDTVNKNE 237


>ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus communis]
           gi|223549071|gb|EEF50560.1| hypothetical protein
           RCOM_1616170 [Ricinus communis]
          Length = 311

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 68/281 (24%), Positives = 106/281 (37%), Gaps = 78/281 (27%)
 Frame = +3

Query: 12  THSCQRNQSPWDV-PTTFSSATVTPFFQVQEIESLLENKAI---------KSVASM---- 149
           TH CQ NQSPWDV P +  +   +   Q +  +S   N ++          SVAS+    
Sbjct: 25  THVCQLNQSPWDVIPFSQEAYQSSHLHQYEGEDSFSGNGSLADSIGAVESSSVASLMEYD 84

Query: 150 ---KLSLAGRDNNACLYDEE--------REKEAVNIS--------------YCAKTDENG 254
              K ++  + NN  + D++        +EK+ ++                YC    +  
Sbjct: 85  PEDKAAIKIKVNNMVIVDDDNYEIRRINQEKKTMSEEDCEFNHKLKKGEKIYCCNKIDGK 144

Query: 255 NWICGLEAKEGETFCEFHLQSYI--------------APLVRPVTKKGTSNINQAKKSK- 389
            W C  E KEG + C+ H+ S +              +P   P  KK    +   ++ + 
Sbjct: 145 EWHCKNELKEGHSMCDHHILSSLKSSYNNNVTSACIASPTNSPSIKKPEKAVAGTRRGRG 204

Query: 390 --------SEFNPYKSLYYYESFGPTWGKRKIARELSKKSED-------VVAMHLLTXXX 524
                   S  NPY+  YYY  FGP WGKR+  R    K+E         +A+H  T   
Sbjct: 205 KGAKKGQSSSSNPYE-FYYYSGFGPLWGKRRGDRGEGNKNESKESEISGAIAIHHNTTPF 263

Query: 525 XXXXXXXXXXXXXXXXXGDEN---------GKKRVRRRIKA 620
                             D++         GKKR+R+ +KA
Sbjct: 264 SAPLPIEDHQELDFVDEDDDDDEDSEGGDIGKKRMRKPVKA 304


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