BLASTX nr result

ID: Cnidium21_contig00043979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043979
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510364.1| hypothetical protein RCOM_1593930 [Ricinus c...    70   3e-10
ref|XP_002320586.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06
ref|XP_003516304.1| PREDICTED: uncharacterized protein LOC100815...    57   4e-06

>ref|XP_002510364.1| hypothetical protein RCOM_1593930 [Ricinus communis]
           gi|223551065|gb|EEF52551.1| hypothetical protein
           RCOM_1593930 [Ricinus communis]
          Length = 788

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
 Frame = +2

Query: 113 EHPCLLKVERITKQSDQEFSVSDCSDNEDEIEGLDDLSFGEITLKELRKTCKTKKRK--- 283
           E  C  + ERIT +S+ E   S    +E+  + LDDL FG +TLK++++ CK KKRK   
Sbjct: 75  ESLCTFEDERITVKSEDETPESSSEGSENGAKELDDLIFGNMTLKQIKERCKKKKRKSFR 134

Query: 284 ---MSDSVCLSP------NFQQDEDDCDLTTPLSSWNTKPSKSAKSVNKHARRSSSAIPE 436
               SD    +P      + Q +ED+ D+  PLS W +K  K  K+  K   R  S    
Sbjct: 135 FVDSSDEDTCTPGKPNHFSLQSEEDEYDIMEPLSCWKSKILKKKKTQKK--CRGDSVRSS 192

Query: 437 RDCLFTTDQILDPPCSQ---QSSNANCAPTAIKVE 532
                +  +  + P  Q   Q S    AP AIKVE
Sbjct: 193 SQNALSIVKFEETPSDQVIFQHSENFPAPIAIKVE 227


>ref|XP_002320586.1| predicted protein [Populus trichocarpa] gi|222861359|gb|EEE98901.1|
           predicted protein [Populus trichocarpa]
          Length = 1004

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 24/202 (11%)
 Frame = +2

Query: 2   FRNLIDIYEDDSTKHLH----EPSEVELQD---GCENGEVEHI-VEHPCLLKVERITKQS 157
           F+ L DIYE     + H       ++EL+D     +  E E + V     +K+E  + +S
Sbjct: 32  FKELKDIYETGEAGNHHLLPAARPKLELEDWSIDSDRAETESLHVLAGATIKIESESPES 91

Query: 158 DQEFSVSDCSDNEDEIEGLDDLSFGEITLKELRKTCKTKKRKMSDSVCL----------- 304
           +   SV D    E      DD++FG +TLK+ ++  K+KKRK+S +  L           
Sbjct: 92  NCS-SVVDGGKTES-----DDVNFGTMTLKQFKERYKSKKRKLSRNAGLIGQTSETCSPA 145

Query: 305 ---SPNFQQDEDDCDLTTPLSSWNTKPSKSAKSVNKHARRS--SSAIPERDCLFTTDQIL 469
               P+ Q + ++ +   PLSSW ++  KS K   K    S  SS+     C+  + +  
Sbjct: 146 KQEPPDSQFELEELEAMEPLSSWKSRILKSRKKKRKCRLESSFSSSSESAPCIVKSKREK 205

Query: 470 DPPCSQQSSNANCAPTAIKVEV 535
                 QSS    AP  +KVEV
Sbjct: 206 SDQVIFQSSGILPAPIDVKVEV 227


>ref|XP_003516304.1| PREDICTED: uncharacterized protein LOC100815294 [Glycine max]
          Length = 869

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 37/232 (15%)
 Frame = +2

Query: 68  ELQDGCENGEVEHIVEHPCLLKVERITKQSDQEFSVSDCSDNEDE-IEGLDDLSFGEITL 244
           ++ DG  +   + + E  CL ++E    ++  + S+ + +D++D+ I  LDD +F   TL
Sbjct: 40  DIYDGLLSHNDDGMAERSCLGEIEESPVKTKPDASICNVNDDDDQRIINLDDDNFDNFTL 99

Query: 245 KELRKTCKTKKRKMSDSVCLS--------PNFQQD-------EDDCDLTTPLSSWNTKPS 379
            +++ +CKT+KRK S  +  S         +F +D        DD D    LSS  +K S
Sbjct: 100 SQIKASCKTRKRKHSQGLDSSKINMKVEDSSFLEDYREEQRAADDSDFLQTLSSLKSKLS 159

Query: 380 KSAKSVNKHARRSSSAIPERDCLFT----TDQILD----PPCSQQSSNAN-CAPTAIKV- 529
           K+ K+  K      S    ++ +       ++IL+    PP S++  + +  +P++ ++ 
Sbjct: 160 KNMKTKKKKCFEEPSPTDTQEIMLVIKSEPEEILNNQEFPPSSEEILDYHEFSPSSQEIQ 219

Query: 530 ---EVSPVCCSEPQTVSFAEEATDGSSIS--------DEQVNLFDMDSSKLL 652
              E SP C          EE  DG            D+++  F  DS  L+
Sbjct: 220 DCQEFSPSC----------EEIQDGQEFPPTSEEIKIDQEIPFFSGDSVALV 261


Top