BLASTX nr result

ID: Cnidium21_contig00043949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043949
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...    85   7e-15
ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi...    82   6e-14
emb|CBI29242.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|NP_001077639.1| ATP-dependent DNA helicase Q-like 2 [Arabido...    80   1e-13

>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
           vinifera]
          Length = 711

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = +1

Query: 82  HGGIFPHSVLSTQQISRLSSQKPITMKELENIIGKLKSEKYGSKILDEIKRYESENQ 252
           HGGIFPHSVLSTQQIS LS+QKP ++ ELE +IGKLK+EKYGSKIL+EI +Y    Q
Sbjct: 618 HGGIFPHSVLSTQQISILSAQKPTSILELETMIGKLKTEKYGSKILEEIAKYTETEQ 674


>ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
           gi|297339688|gb|EFH70105.1| RECQL2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 704

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/61 (60%), Positives = 53/61 (86%)
 Frame = +1

Query: 76  AIHGGIFPHSVLSTQQISRLSSQKPITMKELENIIGKLKSEKYGSKILDEIKRYESENQK 255
           A  G I PH+VLSTQQIS +SSQKP++++ELE+IIGKLK+EKYG +IL+E+ R+E+ +++
Sbjct: 609 AADGSILPHTVLSTQQISLISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEAVSEQ 668

Query: 256 L 258
           L
Sbjct: 669 L 669


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/57 (68%), Positives = 47/57 (82%)
 Frame = +1

Query: 82  HGGIFPHSVLSTQQISRLSSQKPITMKELENIIGKLKSEKYGSKILDEIKRYESENQ 252
           HGGIFPHSVLSTQQIS LS+QKP ++ E + +IGKLK+EKYGSKIL+EI +Y    Q
Sbjct: 618 HGGIFPHSVLSTQQISILSAQKPTSILEAKTMIGKLKTEKYGSKILEEIAKYTETEQ 674


>ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|222841821|gb|EEE79368.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/57 (71%), Positives = 48/57 (84%), Gaps = 5/57 (8%)
 Frame = +1

Query: 82  HGGIFPHSVLSTQQISRLSSQKPITMKE-----LENIIGKLKSEKYGSKILDEIKRY 237
           HGGIFPHSVLS+QQ+S +SSQKP + +E     LE IIGKLK+EKYGSKILDEIK+Y
Sbjct: 621 HGGIFPHSVLSSQQMSMISSQKPSSAQEASPYHLEKIIGKLKTEKYGSKILDEIKKY 677


>ref|NP_001077639.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
           gi|332193226|gb|AEE31347.1| ATP-dependent DNA helicase
           Q-like 2 [Arabidopsis thaliana]
          Length = 580

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/61 (59%), Positives = 52/61 (85%)
 Frame = +1

Query: 76  AIHGGIFPHSVLSTQQISRLSSQKPITMKELENIIGKLKSEKYGSKILDEIKRYESENQK 255
           A  G I PH+VLSTQQI  +SSQKP++++ELE+IIGKLK+EKYG +IL+E+ R+E+ +++
Sbjct: 485 AADGSILPHTVLSTQQIGSISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEAVSEQ 544

Query: 256 L 258
           L
Sbjct: 545 L 545


Top