BLASTX nr result

ID: Cnidium21_contig00043945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043945
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283700.1| PREDICTED: peregrin [Vitis vinifera]              148   5e-34
ref|XP_002531248.1| mixed-lineage leukemia protein, putative [Ri...   145   4e-33
ref|XP_002885053.1| predicted protein [Arabidopsis lyrata subsp....   141   5e-32
ref|NP_566491.1| RING/FYVE/PHD zinc finger-containing protein [A...   141   5e-32
ref|NP_974313.1| RING/FYVE/PHD zinc finger-containing protein [A...   141   5e-32

>ref|XP_002283700.1| PREDICTED: peregrin [Vitis vinifera]
          Length = 347

 Score =  148 bits (373), Expect = 5e-34
 Identities = 66/100 (66%), Positives = 76/100 (76%), Gaps = 4/100 (4%)
 Frame = -1

Query: 290 CDLMVHTTCYGSPLTNCVPEGDWFCSKCLFT----KKNNTKVVSCCLCPETNGAMKQTVD 123
           CDLMVH TCYG+PL   VPEGDWFC++CL +     K N K  SCCLCP T GAMK T D
Sbjct: 171 CDLMVHATCYGNPLVKGVPEGDWFCNQCLGSHSSQNKKNPKAFSCCLCPNTGGAMKPTED 230

Query: 122 KNWAHIVCALFVPEVFFKDSEGREGIDCSEVPSRRFRKKC 3
             WAHIVCAL VPEVFFKD EGR+G+D S+VP RR+++KC
Sbjct: 231 GRWAHIVCALLVPEVFFKDPEGRDGVDRSKVPLRRWKEKC 270


>ref|XP_002531248.1| mixed-lineage leukemia protein, putative [Ricinus communis]
           gi|223529167|gb|EEF31145.1| mixed-lineage leukemia
           protein, putative [Ricinus communis]
          Length = 344

 Score =  145 bits (365), Expect = 4e-33
 Identities = 61/96 (63%), Positives = 75/96 (78%)
 Frame = -1

Query: 290 CDLMVHTTCYGSPLTNCVPEGDWFCSKCLFTKKNNTKVVSCCLCPETNGAMKQTVDKNWA 111
           CDLMVHTTCYG+PL   VPEGDWFC++CL ++ +    VSCCLC   +GA+K T D  WA
Sbjct: 172 CDLMVHTTCYGNPLIKGVPEGDWFCTRCLNSESDKPNTVSCCLCTTKDGALKPTTDGLWA 231

Query: 110 HIVCALFVPEVFFKDSEGREGIDCSEVPSRRFRKKC 3
           HIVCA+ VPEVFF+D +GREGI+CS+VP RR+  KC
Sbjct: 232 HIVCAVLVPEVFFEDPDGREGINCSKVPKRRWEDKC 267


>ref|XP_002885053.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330893|gb|EFH61312.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  141 bits (356), Expect = 5e-32
 Identities = 59/96 (61%), Positives = 73/96 (76%)
 Frame = -1

Query: 290 CDLMVHTTCYGSPLTNCVPEGDWFCSKCLFTKKNNTKVVSCCLCPETNGAMKQTVDKNWA 111
           CDLMVH +CYG+PL   +PEGDWFC +C+ + KN  K+ SCCLC    GAMK T D  WA
Sbjct: 172 CDLMVHASCYGNPLVKAIPEGDWFCRQCI-SSKNREKLFSCCLCTTKGGAMKPTNDGRWA 230

Query: 110 HIVCALFVPEVFFKDSEGREGIDCSEVPSRRFRKKC 3
           HI CALFVPEV+F+D EGREGI C E+PS+R++ +C
Sbjct: 231 HITCALFVPEVYFEDPEGREGICCREIPSKRWKDRC 266


>ref|NP_566491.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|21618148|gb|AAM67198.1| similar to zinc-finger
           protein [Arabidopsis thaliana]
           gi|332642040|gb|AEE75561.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 341

 Score =  141 bits (356), Expect = 5e-32
 Identities = 61/96 (63%), Positives = 73/96 (76%)
 Frame = -1

Query: 290 CDLMVHTTCYGSPLTNCVPEGDWFCSKCLFTKKNNTKVVSCCLCPETNGAMKQTVDKNWA 111
           CDLMVH +CYG+PL   +PEGDWFC +CL + KN  K+ SCCLC    GAMK T D  WA
Sbjct: 173 CDLMVHASCYGNPLVKAIPEGDWFCRQCL-SSKNREKIFSCCLCTTKGGAMKPTNDGRWA 231

Query: 110 HIVCALFVPEVFFKDSEGREGIDCSEVPSRRFRKKC 3
           HI CALFVPEV+F+D EGREGI CSEV S+R++ +C
Sbjct: 232 HITCALFVPEVYFEDPEGREGICCSEVLSKRWKDRC 267


>ref|NP_974313.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|9294395|dbj|BAB02405.1| unnamed protein product
           [Arabidopsis thaliana] gi|225898643|dbj|BAH30452.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332642041|gb|AEE75562.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 343

 Score =  141 bits (356), Expect = 5e-32
 Identities = 61/96 (63%), Positives = 73/96 (76%)
 Frame = -1

Query: 290 CDLMVHTTCYGSPLTNCVPEGDWFCSKCLFTKKNNTKVVSCCLCPETNGAMKQTVDKNWA 111
           CDLMVH +CYG+PL   +PEGDWFC +CL + KN  K+ SCCLC    GAMK T D  WA
Sbjct: 173 CDLMVHASCYGNPLVKAIPEGDWFCRQCL-SSKNREKIFSCCLCTTKGGAMKPTNDGRWA 231

Query: 110 HIVCALFVPEVFFKDSEGREGIDCSEVPSRRFRKKC 3
           HI CALFVPEV+F+D EGREGI CSEV S+R++ +C
Sbjct: 232 HITCALFVPEVYFEDPEGREGICCSEVLSKRWKDRC 267


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