BLASTX nr result
ID: Cnidium21_contig00043919
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00043919 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26088.3| unnamed protein product [Vitis vinifera] 50 3e-09 emb|CAN82618.1| hypothetical protein VITISV_000119 [Vitis vinifera] 50 3e-09 ref|XP_002276298.2| PREDICTED: protein ALWAYS EARLY 3-like [Viti... 48 7e-09 ref|XP_002330359.1| predicted protein [Populus trichocarpa] gi|2... 43 1e-06 ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucu... 43 5e-06 >emb|CBI26088.3| unnamed protein product [Vitis vinifera] Length = 1127 Score = 49.7 bits (117), Expect(2) = 3e-09 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 9/108 (8%) Frame = -3 Query: 316 THMSESQLVEAREVGMKLTNKGKRSSQSAS----PILNKHPENSSSSTGPRREAGDSAMS 149 +++S SQ EA + G K +KGKRSS SAS L K PE SSST RRE + + Sbjct: 446 SNLSVSQKTEATDEGKKPVSKGKRSSHSASHPKQGKLVKPPERCSSSTETRREE-NYLVV 504 Query: 148 SVHLPGADQFDVTNKAKSRR-----KSKIHKVYTYADSELSDRTVVCI 20 + A+Q + K +SRR K K +A++ ++D+ ++ I Sbjct: 505 PAQVSSANQVHLPTKVRSRRKMDTQKPSFQKDLRFAENYVNDQPIIPI 552 Score = 36.6 bits (83), Expect(2) = 3e-09 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -1 Query: 45 YQIERWCAFEWFYSA 1 Y++ RWCAFEWFYSA Sbjct: 573 YRVRRWCAFEWFYSA 587 >emb|CAN82618.1| hypothetical protein VITISV_000119 [Vitis vinifera] Length = 928 Score = 49.7 bits (117), Expect(2) = 3e-09 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 9/108 (8%) Frame = -3 Query: 316 THMSESQLVEAREVGMKLTNKGKRSSQSAS----PILNKHPENSSSSTGPRREAGDSAMS 149 +++S SQ EA + G K +KGKRSS SAS L K PE SSST RRE + + Sbjct: 203 SNLSVSQKTEATDEGKKPVSKGKRSSHSASHPKQGKLVKPPERCSSSTETRREE-NYLVV 261 Query: 148 SVHLPGADQFDVTNKAKSRR-----KSKIHKVYTYADSELSDRTVVCI 20 + A+Q + K +SRR K K +A++ ++D+ ++ I Sbjct: 262 PAQVSSANQVHLPTKVRSRRKMDTQKPSFQKDLRFAENYVNDQPIIPI 309 Score = 36.6 bits (83), Expect(2) = 3e-09 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -1 Query: 45 YQIERWCAFEWFYSA 1 Y++ RWCAFEWFYSA Sbjct: 330 YRVRRWCAFEWFYSA 344 >ref|XP_002276298.2| PREDICTED: protein ALWAYS EARLY 3-like [Vitis vinifera] Length = 1146 Score = 48.1 bits (113), Expect(2) = 7e-09 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Frame = -3 Query: 316 THMSESQLVEAREVGMKLTNKGKRSSQSAS----PILNKHPENSSSSTGPRREAGDSAMS 149 +++S SQ EA + G K +KGKRSS SAS L K PE SSST RRE + + Sbjct: 485 SNLSVSQKTEATDEGKKPVSKGKRSSHSASHPKQGKLVKPPERCSSSTETRREE-NYLVV 543 Query: 148 SVHLPGADQFDVTNKAKSRRKSKIHK 71 + A+Q + K +SRRK K Sbjct: 544 PAQVSSANQVHLPTKVRSRRKMDTQK 569 Score = 36.6 bits (83), Expect(2) = 7e-09 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -1 Query: 45 YQIERWCAFEWFYSA 1 Y++ RWCAFEWFYSA Sbjct: 592 YRVRRWCAFEWFYSA 606 >ref|XP_002330359.1| predicted protein [Populus trichocarpa] gi|222871563|gb|EEF08694.1| predicted protein [Populus trichocarpa] Length = 980 Score = 43.1 bits (100), Expect(2) = 1e-06 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Frame = -3 Query: 259 NKGKRSSQSASPI---LNKHPENSSSSTGPRREAGDSAMSSVHLPGADQFDVTNKAKSRR 89 +KGKRS +A L K E +SSS RE +SA +++ + A QF++ K +S R Sbjct: 330 SKGKRSQYAAHSKQGKLMKSAERTSSSNNHGRELNNSAPTTIQVLSASQFNLPTKVRSSR 389 Query: 88 KSKIHKVYTYADSELSDRTV 29 K K+ DS+ S+ V Sbjct: 390 KLNTPKMLVERDSKSSENIV 409 Score = 34.3 bits (77), Expect(2) = 1e-06 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -1 Query: 54 IRNYQIERWCAFEWFYSA 1 + Y + RWC FEWFYSA Sbjct: 433 LSRYLVRRWCVFEWFYSA 450 >ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucumis sativus] Length = 1161 Score = 42.7 bits (99), Expect(2) = 5e-06 Identities = 26/78 (33%), Positives = 44/78 (56%) Frame = -3 Query: 259 NKGKRSSQSASPILNKHPENSSSSTGPRREAGDSAMSSVHLPGADQFDVTNKAKSRRKSK 80 N G +S + + P+ +SSSST +RE GD A+S+ + + + K +SRRK K Sbjct: 519 NAGLKSGKISKPL----DHHSSSSTDHKREDGDYALSTAQVLSNNPISLPTKLRSRRKMK 574 Query: 79 IHKVYTYADSELSDRTVV 26 + K + D+++SD T + Sbjct: 575 LWK--SQRDAKISDSTSI 590 Score = 32.3 bits (72), Expect(2) = 5e-06 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -1 Query: 45 YQIERWCAFEWFYSA 1 +++ RWC FEWFYSA Sbjct: 618 HKLRRWCIFEWFYSA 632