BLASTX nr result

ID: Cnidium21_contig00043873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043873
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309593.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003544623.1| PREDICTED: transcriptional corepressor LEUNI...    61   8e-08
ref|XP_003544622.1| PREDICTED: transcriptional corepressor LEUNI...    61   8e-08
ref|XP_004138746.1| PREDICTED: transcriptional corepressor LEUNI...    57   1e-06
ref|XP_004138745.1| PREDICTED: transcriptional corepressor LEUNI...    57   1e-06

>ref|XP_002309593.1| predicted protein [Populus trichocarpa] gi|222855569|gb|EEE93116.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
 Frame = -2

Query: 273 GSGLQEGYPLLASEDGDVVTKQNNEQRQQHRQGAVR-------------KKSQNSDCTQY 133
           GS LQ G PLL+  D D++ KQ  +Q+QQ +Q +               ++SQ+S+   +
Sbjct: 408 GSPLQTGGPLLSRGDPDMLMKQQQQQQQQQQQQSSNPQQQLLQQHVLSNQQSQSSNHNLH 467

Query: 132 KQDKEVYGGSSTMFDDSLSNSSQRNDQPPKNRTGQKRK--VSSSG 4
            QDK    GS  + D S+SNS + NDQ  KN TG+KRK  VSSSG
Sbjct: 468 PQDKMGDAGSVNV-DGSISNSFRGNDQVSKNPTGRKRKQPVSSSG 511


>ref|XP_003544623.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform 2
           [Glycine max]
          Length = 893

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
 Frame = -2

Query: 276 LGSGLQEGYPLLASEDGDVVTK----------QN-NEQRQQHRQGAV-RKKSQNSDCTQY 133
           LGS LQ G P     D D++ K          QN N Q+QQ +Q  +  ++SQ S+ + +
Sbjct: 393 LGSPLQAGGPAFPRSDTDMLMKLKLAQLQHQQQNANPQQQQLQQHTLSNQQSQTSNHSMH 452

Query: 132 KQDKEVYGGSSTMFDDSLSNSSQRNDQPPKNRTGQKRKVSSS 7
           +QDK   GG S   D S+SNS + NDQ  KN+TG+KRK  +S
Sbjct: 453 QQDKMGGGGGSVNVDGSMSNSFRGNDQVSKNQTGRKRKQPAS 494


>ref|XP_003544622.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform 1
           [Glycine max]
          Length = 902

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
 Frame = -2

Query: 276 LGSGLQEGYPLLASEDGDVVTK----------QN-NEQRQQHRQGAV-RKKSQNSDCTQY 133
           LGS LQ G P     D D++ K          QN N Q+QQ +Q  +  ++SQ S+ + +
Sbjct: 393 LGSPLQAGGPAFPRSDTDMLMKLKLAQLQHQQQNANPQQQQLQQHTLSNQQSQTSNHSMH 452

Query: 132 KQDKEVYGGSSTMFDDSLSNSSQRNDQPPKNRTGQKRKVSSS 7
           +QDK   GG S   D S+SNS + NDQ  KN+TG+KRK  +S
Sbjct: 453 QQDKMGGGGGSVNVDGSMSNSFRGNDQVSKNQTGRKRKQPAS 494


>ref|XP_004138746.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform 2
           [Cucumis sativus]
          Length = 891

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 20/111 (18%)
 Frame = -2

Query: 276 LGSGLQEGYPLLASEDG-DVVTK-------------QNNEQRQQHRQ----GAVRKKSQN 151
           +GS LQ G PLL   D  D++ K             Q++ Q+QQ +Q        ++SQ+
Sbjct: 384 VGSPLQAGSPLLPRGDNTDMILKIKMAQLQQQQQQQQSSSQQQQQQQLQQHALSNQQSQS 443

Query: 150 SDCTQYKQDKEVYGGSSTMFDDSLSNSSQRNDQPPKNRTGQKRK--VSSSG 4
           S+   ++Q+K    GS TM D S+SNS + NDQ  KN+TG+KRK  VSSSG
Sbjct: 444 SNHNMHQQEKIGGAGSVTM-DGSMSNSFRGNDQVSKNQTGRKRKQPVSSSG 493


>ref|XP_004138745.1| PREDICTED: transcriptional corepressor LEUNIG-like isoform 1
           [Cucumis sativus]
          Length = 900

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 20/111 (18%)
 Frame = -2

Query: 276 LGSGLQEGYPLLASEDG-DVVTK-------------QNNEQRQQHRQ----GAVRKKSQN 151
           +GS LQ G PLL   D  D++ K             Q++ Q+QQ +Q        ++SQ+
Sbjct: 384 VGSPLQAGSPLLPRGDNTDMILKIKMAQLQQQQQQQQSSSQQQQQQQLQQHALSNQQSQS 443

Query: 150 SDCTQYKQDKEVYGGSSTMFDDSLSNSSQRNDQPPKNRTGQKRK--VSSSG 4
           S+   ++Q+K    GS TM D S+SNS + NDQ  KN+TG+KRK  VSSSG
Sbjct: 444 SNHNMHQQEKIGGAGSVTM-DGSMSNSFRGNDQVSKNQTGRKRKQPVSSSG 493


Top