BLASTX nr result

ID: Cnidium21_contig00043866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043866
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P48786.1|PRH_PETCR RecName: Full=Pathogenesis-related homeodo...   100   2e-19

>sp|P48786.1|PRH_PETCR RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHP
           gi|666128|gb|AAA62237.1| homeodomain protein
           [Petroselinum crispum]
          Length = 1088

 Score =  100 bits (248), Expect = 2e-19
 Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
 Frame = +2

Query: 5   SGTKPKELERVHNTIPNGNCTTPVRKENAMAEDVQSAGTNVEVYI-SVGAKIVPSADDST 181
           S  KP  LE+V  T+PNG CT PV+ E ++A DVQ      +V I S   +IV S +D T
Sbjct: 5   SDPKPNALEQVLPTVPNGKCTAPVQME-SLAVDVQKVSGEAKVRICSCWCEIVRSPEDLT 63

Query: 182 ELRPFGELPQDTKLCSPSPVKVQAENLTEILSNSKQVTPDHN--LKFSSEMVDNEA-EEN 352
           +L P  +  +D KL    P++ +AE+   I    KQVT  HN   +  SEMV NE  +EN
Sbjct: 64  KLVPCNDFAEDIKLFDSDPMQQEAESSIGIPLIPKQVTMSHNHDHESGSEMVSNEVMQEN 123

Query: 353 HVIATKNTDNGPIEDQNSEFDHISMEQEGTLPEK 454
           HVIAT+NT       Q S+FD I+M Q+ T+PE+
Sbjct: 124 HVIATENT------YQKSDFDRINMGQKETMPEE 151


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