BLASTX nr result

ID: Cnidium21_contig00043861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043861
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]                            197   1e-48
dbj|BAA20532.1| unnamed protein product [Daucus carota]               197   1e-48
gb|ACG60686.1| En/Spm-related transposon protein [Brassica olera...   136   2e-32
gb|ABM55245.1| transposon-like protein [Beta vulgaris]                137   7e-31
dbj|BAF36287.1| hypothetical protein [Ipomoea trifida]                137   7e-31

>dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]
          Length = 812

 Score =  197 bits (500), Expect = 1e-48
 Identities = 90/111 (81%), Positives = 96/111 (86%)
 Frame = -2

Query: 334 KNSTCFCLYLCLDQKNPKQKIDVFLQPLVAELKMLWEVGVETCDNSLKQNFRMRAALMWT 155
           K    F   L    +NPKQKIDVFLQPL++ELKMLWEVGVET D SLKQNF+MRAALMWT
Sbjct: 38  KEEYMFLSILVPGPRNPKQKIDVFLQPLISELKMLWEVGVETWDTSLKQNFQMRAALMWT 97

Query: 154 ISDFPAYSMLSGWKTASHLACPHCAHDHDAYNLRHGGKTTWFDNHRKFLPA 2
           ISDFPAYSMLSGWKTA HLACPHCAH+HDAYNL+HGGK TWFDNHRKFLPA
Sbjct: 98  ISDFPAYSMLSGWKTAGHLACPHCAHEHDAYNLKHGGKPTWFDNHRKFLPA 148


>dbj|BAA20532.1| unnamed protein product [Daucus carota]
          Length = 520

 Score =  197 bits (500), Expect = 1e-48
 Identities = 90/111 (81%), Positives = 96/111 (86%)
 Frame = -2

Query: 334 KNSTCFCLYLCLDQKNPKQKIDVFLQPLVAELKMLWEVGVETCDNSLKQNFRMRAALMWT 155
           K    F   L    +NPKQKIDVFLQPL++ELKMLWEVGVET D SLKQNF+MRAALMWT
Sbjct: 364 KEEYMFLSILVPGPRNPKQKIDVFLQPLISELKMLWEVGVETWDTSLKQNFQMRAALMWT 423

Query: 154 ISDFPAYSMLSGWKTASHLACPHCAHDHDAYNLRHGGKTTWFDNHRKFLPA 2
           ISDFPAYSMLSGWKTA HLACPHCAH+HDAYNL+HGGK TWFDNHRKFLPA
Sbjct: 424 ISDFPAYSMLSGWKTAGHLACPHCAHEHDAYNLKHGGKPTWFDNHRKFLPA 474


>gb|ACG60686.1| En/Spm-related transposon protein [Brassica oleracea var.
           alboglabra]
          Length = 695

 Score =  136 bits (343), Expect(2) = 2e-32
 Identities = 59/96 (61%), Positives = 74/96 (77%)
 Frame = -2

Query: 292 KNPKQKIDVFLQPLVAELKMLWEVGVETCDNSLKQNFRMRAALMWTISDFPAYSMLSGWK 113
           ++PK+ +D+FLQPL+ EL+ LW  G ET D S K+NF+MRA LMWTISDFPAY MLSGW 
Sbjct: 374 EHPKRSLDLFLQPLIYELQQLWAQGAETYDVSCKENFQMRAVLMWTISDFPAYGMLSGWT 433

Query: 112 TASHLACPHCAHDHDAYNLRHGGKTTWFDNHRKFLP 5
           T   L+CP+C  + DA+ L+HG KT WFD HR+FLP
Sbjct: 434 THERLSCPYCQDNTDAFQLKHGRKTCWFDCHRRFLP 469



 Score = 27.7 bits (60), Expect(2) = 2e-32
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -1

Query: 335 KEQYLFLSVLVPGPKKSK 282
           + ++LFLS+LVPGP+  K
Sbjct: 360 RREFLFLSILVPGPEHPK 377


>gb|ABM55245.1| transposon-like protein [Beta vulgaris]
          Length = 1399

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/109 (59%), Positives = 73/109 (66%)
 Frame = -2

Query: 334 KNSTCFCLYLCLDQKNPKQKIDVFLQPLVAELKMLWEVGVETCDNSLKQNFRMRAALMWT 155
           K    F   L    KNPK  +DVF+QPLV ELK LW +G  T D S KQNF +RAAL+WT
Sbjct: 253 KKPFMFLSLLVPGPKNPKANLDVFMQPLVEELKQLWHIGAMTYDVSRKQNFNLRAALLWT 312

Query: 154 ISDFPAYSMLSGWKTASHLACPHCAHDHDAYNLRHGGKTTWFDNHRKFL 8
           ISDFPAY MLSGW TA   ACP+C     A+ L HGGK TWFD HR+FL
Sbjct: 313 ISDFPAYGMLSGWSTAGKKACPYCMDKSKAFWLEHGGKVTWFDCHRQFL 361


>dbj|BAF36287.1| hypothetical protein [Ipomoea trifida]
          Length = 853

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/97 (63%), Positives = 76/97 (78%)
 Frame = -2

Query: 295 QKNPKQKIDVFLQPLVAELKMLWEVGVETCDNSLKQNFRMRAALMWTISDFPAYSMLSGW 116
           + NPK  IDV+LQPL+ EL++LWE GV T D SL+QNF MRA LMWTI+DFPAY MLSGW
Sbjct: 433 EHNPKANIDVYLQPLIDELQLLWETGVLTYDVSLQQNFMMRAMLMWTINDFPAYGMLSGW 492

Query: 115 KTASHLACPHCAHDHDAYNLRHGGKTTWFDNHRKFLP 5
           +TA  LACP+C H   ++ L++G KT WFD HR+FLP
Sbjct: 493 QTAGKLACPYCNHYTKSFYLKNGRKTCWFDCHRQFLP 529


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