BLASTX nr result

ID: Cnidium21_contig00043826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043826
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    42   7e-08
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    48   1e-07
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    45   2e-07
ref|XP_002525921.1| conserved hypothetical protein [Ricinus comm...    40   1e-06
ref|XP_003599995.1| hypothetical protein MTR_3g050230 [Medicago ...    42   4e-06

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 42.4 bits (98), Expect(2) = 7e-08
 Identities = 17/59 (28%), Positives = 34/59 (57%)
 Frame = -1

Query: 180 PDHVTEAIGIREALSWVKKKECMTAAIETDYLSLIQAIRCSSTNLSYLGRVVNDCKSLV 4
           P    EA+G+R+A+ W+ + E     +E D   ++ +I   + N +  G +++DC+SL+
Sbjct: 106 PPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLL 164



 Score = 38.9 bits (89), Expect(2) = 7e-08
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 329 WE*PLHGMVKINTDAAIFESSSCYSYSMIVRDHQGEMVEAFSTCKQGDMDP 177
           W+ P  G +K N DAAIF   + +   M VRD +G  ++A +   +G   P
Sbjct: 57  WQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPP 107


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 20/57 (35%), Positives = 34/57 (59%)
 Frame = -1

Query: 171 VTEAIGIREALSWVKKKECMTAAIETDYLSLIQAIRCSSTNLSYLGRVVNDCKSLVS 1
           + E + I+EALSW + ++ +    E D L +++A+    T+ S LG ++ DCK L S
Sbjct: 80  IAEGLAIQEALSWARDRQLLNVVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSS 136



 Score = 32.7 bits (73), Expect(2) = 1e-07
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 329 WE*PLHGMVKINTDAAIFESSSCYSYSMIVRDHQGEMVEAFSTCKQGDMDP 177
           W  P  G +K+N DA IF +        +++DH G  V A +    G   P
Sbjct: 28  WNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIP 78


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 20/52 (38%), Positives = 32/52 (61%)
 Frame = -1

Query: 171 VTEAIGIREALSWVKKKECMTAAIETDYLSLIQAIRCSSTNLSYLGRVVNDC 16
           V EA+G+RE LSW+ ++      +ETD L ++QAI+  S   +  G ++ DC
Sbjct: 714 VVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDC 765



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 329 WE*PLHGMVKINTDAAIFESSSCYSYSMIVRDHQGEMVEAFS 204
           W+ P +G +KIN D A+F      +   + RDHQG  +  F+
Sbjct: 664 WQKPDYGWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFA 703


>ref|XP_002525921.1| conserved hypothetical protein [Ricinus communis]
           gi|223534750|gb|EEF36441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 40.4 bits (93), Expect(2) = 1e-06
 Identities = 21/58 (36%), Positives = 37/58 (63%)
 Frame = -1

Query: 174 HVTEAIGIREALSWVKKKECMTAAIETDYLSLIQAIRCSSTNLSYLGRVVNDCKSLVS 1
           ++ EA+ +REALSW+K       +I+ D L +  A+  +S NLS+ G +++ CK +V+
Sbjct: 104 NLAEAMAVREALSWIKHMNWSRVSIDMDSLGVCVAL--TSDNLSF-GLIIDGCKHVVA 158



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 329 WE*PLHGMVKINTDAAIFESSSCYSYSMIVRDHQGEMVEA 210
           W  P +  +KIN DA IF++ +   Y M+VR+H   +V A
Sbjct: 53  WRKPHNEYLKINEDAGIFQAQNRTGYGMVVRNHAANLVAA 92


>ref|XP_003599995.1| hypothetical protein MTR_3g050230 [Medicago truncatula]
           gi|355489043|gb|AES70246.1| hypothetical protein
           MTR_3g050230 [Medicago truncatula]
          Length = 240

 Score = 42.0 bits (97), Expect(2) = 4e-06
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -2

Query: 329 WE*PLHGMVKINTDAAIFESSSCYSYSMIVRDHQGEMVEA 210
           W+ PL G +K N DA  FE+ +C  + + +RD  GE ++A
Sbjct: 103 WQKPLQGRLKCNVDADFFETLNCVGFGLCIRDEFGEFIKA 142



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = -1

Query: 171 VTEAIGIREALSWVKKKECMTAAIETDYLSLIQAIRCSSTNLSYLGRVVNDCK 13
           + EA+G+  A+ WV++ +      E D   ++        ++S  G +V++CK
Sbjct: 155 IGEALGLSHAIQWVQELQLPNVDFELDAKKVVDYFNRGRNDISEFGAIVDECK 207


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