BLASTX nr result

ID: Cnidium21_contig00043804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043804
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...    82   6e-14
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...    82   6e-14
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...    82   6e-14
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...    82   6e-14
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...    82   6e-14

>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
           200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 202 EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 315
           EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL
Sbjct: 9   EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 46


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Cucumis sativus]
          Length = 2175

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 202 EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 315
           EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL
Sbjct: 9   EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 46


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Glycine max]
          Length = 2183

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 202 EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 315
           EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL
Sbjct: 9   EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 46


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Glycine max]
          Length = 2183

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 202 EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 315
           EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL
Sbjct: 9   EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 46


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
           truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
           ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 202 EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 315
           EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL
Sbjct: 9   EAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL 46


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