BLASTX nr result
ID: Cnidium21_contig00043786
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00043786 (736 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [... 317 1e-84 ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [... 312 4e-83 ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 311 7e-83 ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [... 298 8e-79 ref|XP_002894642.1| pseudouridine synthase family protein [Arabi... 295 7e-78 >ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis] gi|223548464|gb|EEF49955.1| ribosomal pseudouridine synthase, putative [Ricinus communis] Length = 321 Score = 317 bits (813), Expect = 1e-84 Identities = 164/247 (66%), Positives = 188/247 (76%), Gaps = 2/247 (0%) Frame = +2 Query: 2 SPPLPLISKDIELSRAMTASSKSSLFCLSRTHVLFEDDWLIAVCKPQGVYCEAVLASVPS 181 SPPLP ISK IEL+RA++ASS+SSLF LSR+ VL+ED WLIAV KPQGVYCE VL SVP Sbjct: 27 SPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNKPQGVYCETVLESVPR 86 Query: 182 LLTHS--LDSGQLDTQIKPPEFHLANRLDRDTSGVMLITKSHKVAAKLVKAFTDHKVKKT 355 +L S L + P EFHLANRLDRDTSGVM+ITKSHKVA+KLVKAFTDHK+KKT Sbjct: 87 VLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKIKKT 146 Query: 356 YIASCTGAAPNWQRISIESGHGRSKFGAWRVYATSDVGKKLPGGSVVRDMATIFEVLSVN 535 YIA C G AP W++I+I+SGHGRSKFG WRVYA SDVG+ LPGGS V+DM T FE+LSVN Sbjct: 147 YIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTVKDMETSFELLSVN 206 Query: 536 GQYCTKDXXXXXXXXXXXXXXXXXXTDFGGRKDEIVVRAYPRSGRTHQIRLHCQYLGISI 715 GQ K+ + +K EI+VRA+P+SGRTHQIRLHCQYLGISI Sbjct: 207 GQGSFKELSEFEKDENILVVEEKAAKNADVKKVEILVRAFPQSGRTHQIRLHCQYLGISI 266 Query: 716 RGDVKYE 736 RGDVKYE Sbjct: 267 RGDVKYE 273 >ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus] Length = 366 Score = 312 bits (800), Expect = 4e-83 Identities = 159/246 (64%), Positives = 188/246 (76%), Gaps = 1/246 (0%) Frame = +2 Query: 2 SPPLPLISKDIELSRAMTASSKSSLFCLSRTHVLFEDDWLIAVCKPQGVYCEAVLASVPS 181 SPPLP ISK++EL+RAM ASSKSSL+ LS V++ED+WLIAV KPQG+YCE VLA+VP Sbjct: 62 SPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPR 121 Query: 182 LLTHSLDSGQLDTQIKPPEFHLANRLDRDTSGVMLITKSHKVAAKLVKAFTDHKVKKTYI 361 LL S ++G + T + PE HLANRLDRDTSGVM+ITKSHKVA+KLVKAFTDH V K+YI Sbjct: 122 LLGDSANAG-IKTSL--PELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYI 178 Query: 362 ASCTGAAPNWQRISIESGHGRSKFGAWRVYATSDVGKKLPGGSVVRDMATIFEVLSVNGQ 541 A C G +P W++I+++SGHGRSKFG WRVYA +DVG+ LPGGSVVRDM T FEVLSVNG+ Sbjct: 179 AFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGK 238 Query: 542 YCTKD-XXXXXXXXXXXXXXXXXXTDFGGRKDEIVVRAYPRSGRTHQIRLHCQYLGISIR 718 ++ D KDEI++RA PRSGRTHQIRLHCQYLGI IR Sbjct: 239 NTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIR 298 Query: 719 GDVKYE 736 GDVKYE Sbjct: 299 GDVKYE 304 >ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like [Cucumis sativus] Length = 366 Score = 311 bits (798), Expect = 7e-83 Identities = 159/246 (64%), Positives = 187/246 (76%), Gaps = 1/246 (0%) Frame = +2 Query: 2 SPPLPLISKDIELSRAMTASSKSSLFCLSRTHVLFEDDWLIAVCKPQGVYCEAVLASVPS 181 SPPLP ISK++EL+RAM ASSKSSL+ LS V++ED+WLIAV KPQG+YCE VLA+VP Sbjct: 62 SPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPR 121 Query: 182 LLTHSLDSGQLDTQIKPPEFHLANRLDRDTSGVMLITKSHKVAAKLVKAFTDHKVKKTYI 361 LL S ++G + T + PE HLANRLDRDTSGVM+ITKSHKVA+KLVKAFTDH V K+YI Sbjct: 122 LLGDSANAG-IKTSL--PELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYI 178 Query: 362 ASCTGAAPNWQRISIESGHGRSKFGAWRVYATSDVGKKLPGGSVVRDMATIFEVLSVNGQ 541 A C G +P W +I+++SGHGRSKFG WRVYA +DVG+ LPGGSVVRDM T FEVLSVNG+ Sbjct: 179 AFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGK 238 Query: 542 YCTKD-XXXXXXXXXXXXXXXXXXTDFGGRKDEIVVRAYPRSGRTHQIRLHCQYLGISIR 718 ++ D KDEI++RA PRSGRTHQIRLHCQYLGI IR Sbjct: 239 NTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIR 298 Query: 719 GDVKYE 736 GDVKYE Sbjct: 299 GDVKYE 304 >ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera] Length = 348 Score = 298 bits (763), Expect = 8e-79 Identities = 156/246 (63%), Positives = 179/246 (72%), Gaps = 1/246 (0%) Frame = +2 Query: 2 SPPLPLISKDIELSRAMTASSKSSLFCLSRTHVLFEDDWLIAVCKPQGVYCEAVLASVPS 181 SPPLP ISK IE SRAM+ASS+SSLF L R+ +LFED WL+AV KPQGVYCE +L SV Sbjct: 59 SPPLPAISKHIEQSRAMSASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSR 118 Query: 182 LLTHSLDSGQLDTQIKPPEFHLANRLDRDTSGVMLITKSHKVAAKLVKAFTDHKVKKTYI 361 +L S D HLANRLDRDTSGVM+ITKSH+VAAKL+KAF+D KV KTY+ Sbjct: 119 MLDDS------DGHDSCRSLHLANRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYL 172 Query: 362 ASCTGAAPNWQRISIESGHGRSKFGAWRVYATSDVGKKLPGGSVVRDMATIFEVLSVNGQ 541 A C GAAP W++I+I+SGHGRSKFGAWRVYA SDVG+ LP ++DM T FEVLSVNGQ Sbjct: 173 ALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQ 232 Query: 542 YCTKDXXXXXXXXXXXXXXXXXXT-DFGGRKDEIVVRAYPRSGRTHQIRLHCQYLGISIR 718 K+ D R+DEI+VRA+PRSGRTHQIRLHCQYLGISIR Sbjct: 233 GNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRTHQIRLHCQYLGISIR 292 Query: 719 GDVKYE 736 GDVKYE Sbjct: 293 GDVKYE 298 >ref|XP_002894642.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297340484|gb|EFH70901.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] Length = 321 Score = 295 bits (755), Expect = 7e-78 Identities = 158/244 (64%), Positives = 182/244 (74%) Frame = +2 Query: 2 SPPLPLISKDIELSRAMTASSKSSLFCLSRTHVLFEDDWLIAVCKPQGVYCEAVLASVPS 181 SPP P ISKDIEL RAM ASSKSSLF L+R HVL+ED++L+AV KP+GVYCEAVL S P Sbjct: 45 SPPPPPISKDIELRRAMEASSKSSLFNLTRDHVLYEDEYLMAVNKPKGVYCEAVLRSAPQ 104 Query: 182 LLTHSLDSGQLDTQIKPPEFHLANRLDRDTSGVMLITKSHKVAAKLVKAFTDHKVKKTYI 361 ++ LDS EFHLANRLDRDTSGVM+ITKSHKVAAKLVKAFT+HK++K+YI Sbjct: 105 IV---LDSSS--------EFHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYI 153 Query: 362 ASCTGAAPNWQRISIESGHGRSKFGAWRVYATSDVGKKLPGGSVVRDMATIFEVLSVNGQ 541 A C G++PNW++I++ SGHGRSK GAWRVYA DVG+ LPGGS VRDM T FEV+SVNG Sbjct: 154 ALCIGSSPNWRKITVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNGV 213 Query: 542 YCTKDXXXXXXXXXXXXXXXXXXTDFGGRKDEIVVRAYPRSGRTHQIRLHCQYLGISIRG 721 T+ D D +VVRA+PRSGRTHQIRLHCQYLGISIRG Sbjct: 214 E-TESCEVENVIVVEREQELSCAGD-----DVVVVRAFPRSGRTHQIRLHCQYLGISIRG 267 Query: 722 DVKY 733 DVKY Sbjct: 268 DVKY 271