BLASTX nr result

ID: Cnidium21_contig00043776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043776
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   172   3e-41
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   146   1e-33
emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]   136   2e-30
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]   134   6e-30
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   130   8e-29

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  172 bits (436), Expect = 3e-41
 Identities = 73/103 (70%), Positives = 92/103 (89%)
 Frame = +2

Query: 2    KSTAYHPQTDGQTEIVNKSLETYLRCFIGDKPKSWAKWLPWAEFSYNTSPHCSTKFSPFR 181
            +S+AYHPQTDGQTEIVN++LETYLRCF+G  P+SWAKWLPWAEFSYNTSPH STK SPF+
Sbjct: 1331 RSSAYHPQTDGQTEIVNRALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFK 1390

Query: 182  IVYGRDPPHVIRLGKGQTPVDSLDEFLQERDAVLDNLHFHLLK 310
            ++YGRDPPHV+R  KGQT V+SL+  LQ+RDA++D+L  +L++
Sbjct: 1391 VLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVR 1433


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  146 bits (369), Expect = 1e-33
 Identities = 65/103 (63%), Positives = 81/103 (78%)
 Frame = +2

Query: 2    KSTAYHPQTDGQTEIVNKSLETYLRCFIGDKPKSWAKWLPWAEFSYNTSPHCSTKFSPFR 181
            +STAYHPQ+DGQTE+VNKSLE YLRCF   +PK+WA+W+ WAE+ YNTS H S+ F+PF+
Sbjct: 1264 RSTAYHPQSDGQTEVVNKSLEAYLRCFCNGRPKAWAQWISWAEYWYNTSTHSSSHFTPFK 1323

Query: 182  IVYGRDPPHVIRLGKGQTPVDSLDEFLQERDAVLDNLHFHLLK 310
            IVYGRD P + R  KG T + SL+E L +RDA LD L FHLL+
Sbjct: 1324 IVYGRDSPPLFRFEKGSTAIFSLEEQLLDRDATLDELKFHLLE 1366


>emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]
          Length = 790

 Score =  136 bits (342), Expect = 2e-30
 Identities = 57/101 (56%), Positives = 79/101 (78%)
 Frame = +2

Query: 5   STAYHPQTDGQTEIVNKSLETYLRCFIGDKPKSWAKWLPWAEFSYNTSPHCSTKFSPFRI 184
           S++YHPQ++GQTE+VN++LE YLRCF+GD+P+ W KW+PWAEFSYNTS H STK +PF  
Sbjct: 547 SSSYHPQSNGQTEVVNRTLEQYLRCFVGDQPQKWLKWIPWAEFSYNTSTHSSTKMTPFEA 606

Query: 185 VYGRDPPHVIRLGKGQTPVDSLDEFLQERDAVLDNLHFHLL 307
           VYG  PP ++    G + V ++DE+L++RDA+L  L  +LL
Sbjct: 607 VYGIPPPRLLAYVPGTSHVQAVDEYLRDRDAILRELRXNLL 647


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score =  134 bits (338), Expect = 6e-30
 Identities = 59/100 (59%), Positives = 74/100 (74%)
 Frame = +2

Query: 5    STAYHPQTDGQTEIVNKSLETYLRCFIGDKPKSWAKWLPWAEFSYNTSPHCSTKFSPFRI 184
            STAYHPQTDGQTE+VN+ +ETYLRCF  +KP+ W+ WLPWA++ YNT+ H ST   PFR 
Sbjct: 1029 STAYHPQTDGQTEVVNRCVETYLRCFSYNKPRRWSTWLPWAKYWYNTTFHSSTNMKPFRA 1088

Query: 185  VYGRDPPHVIRLGKGQTPVDSLDEFLQERDAVLDNLHFHL 304
            VYGRDPP ++  G   T V  +D+ LQERD +L+ L  HL
Sbjct: 1089 VYGRDPPPLLHYGSDSTSVLEVDQLLQERDLILNELKDHL 1128


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  130 bits (328), Expect = 8e-29
 Identities = 59/100 (59%), Positives = 74/100 (74%)
 Frame = +2

Query: 5    STAYHPQTDGQTEIVNKSLETYLRCFIGDKPKSWAKWLPWAEFSYNTSPHCSTKFSPFRI 184
            STAYH QTDGQTE+VN+ +ETYLRCF  +KP  W+ W+ WAE+ YNT+ H ST  +PFR 
Sbjct: 741  STAYHXQTDGQTEVVNRCVETYLRCFSYNKPGRWSTWISWAEYWYNTTFHSSTNTTPFRA 800

Query: 185  VYGRDPPHVIRLGKGQTPVDSLDEFLQERDAVLDNLHFHL 304
            VYGRDPP +IR G   T V ++D+ LQERD +L+ L  HL
Sbjct: 801  VYGRDPPPLIRFGSDSTSVLAVDQLLQERDLILNELKDHL 840


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