BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043687
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22748.3| unnamed protein product [Vitis vinifera]              346   2e-93
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   346   2e-93
ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   343   1e-92
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   329   3e-88
ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   328   5e-88

>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  346 bits (887), Expect = 2e-93
 Identities = 164/211 (77%), Positives = 187/211 (88%)
 Frame = +3

Query: 6   TARTFNIVICTCGQAGLARKTVERFVKLKSFSYRPFKHSFNAILYSLLTVKQYKLIEWVY 185
           TARTF I+ICTCG+AGLAR+ VERFVK K+F+YRPFKHS+NAIL+ LL +KQYKL+EWVY
Sbjct: 227 TARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVY 286

Query: 186 QQMLIEGHDPDTLTYNVLMVAKYRLRKLEQFHRLLEEMGRNRFSPDSHTFNILLHVLGKG 365
           QQML+E + PD LTYN++M  KYRL KL+QFHRLLEE+G N FSPD HTFNILLH+LGKG
Sbjct: 287 QQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKG 346

Query: 366 DKPLAALNLLNHMKEVGIEASVLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCLPDVVCY 545
           +KPLAAL+LLNHMKEVG + SVLHFTTLIDGLSRAGNLDACKYFF EM K GC+PDVVCY
Sbjct: 347 NKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCY 406

Query: 546 TVIITGFIVAGELETAQEYFTEMIVKGQVPN 638
           TV+ITG+IVAGELE AQ  F EM VKGQ+PN
Sbjct: 407 TVMITGYIVAGELEMAQGLFEEMTVKGQLPN 437


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  346 bits (887), Expect = 2e-93
 Identities = 164/211 (77%), Positives = 187/211 (88%)
 Frame = +3

Query: 6   TARTFNIVICTCGQAGLARKTVERFVKLKSFSYRPFKHSFNAILYSLLTVKQYKLIEWVY 185
           TARTF I+ICTCG+AGLAR+ VERFVK K+F+YRPFKHS+NAIL+ LL +KQYKL+EWVY
Sbjct: 223 TARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVY 282

Query: 186 QQMLIEGHDPDTLTYNVLMVAKYRLRKLEQFHRLLEEMGRNRFSPDSHTFNILLHVLGKG 365
           QQML+E + PD LTYN++M  KYRL KL+QFHRLLEE+G N FSPD HTFNILLH+LGKG
Sbjct: 283 QQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKG 342

Query: 366 DKPLAALNLLNHMKEVGIEASVLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCLPDVVCY 545
           +KPLAAL+LLNHMKEVG + SVLHFTTLIDGLSRAGNLDACKYFF EM K GC+PDVVCY
Sbjct: 343 NKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCY 402

Query: 546 TVIITGFIVAGELETAQEYFTEMIVKGQVPN 638
           TV+ITG+IVAGELE AQ  F EM VKGQ+PN
Sbjct: 403 TVMITGYIVAGELEMAQGLFEEMTVKGQLPN 433


>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  343 bits (881), Expect = 1e-92
 Identities = 162/212 (76%), Positives = 188/212 (88%)
 Frame = +3

Query: 3   TTARTFNIVICTCGQAGLARKTVERFVKLKSFSYRPFKHSFNAILYSLLTVKQYKLIEWV 182
           TTARTFNI+ICTCG AGLARK VERF+K K+F+YRPFKHS+NAIL SLL +++YKLIEWV
Sbjct: 187 TTARTFNILICTCGGAGLARKVVERFIKSKTFNYRPFKHSYNAILLSLLAIREYKLIEWV 246

Query: 183 YQQMLIEGHDPDTLTYNVLMVAKYRLRKLEQFHRLLEEMGRNRFSPDSHTFNILLHVLGK 362
           +QQML+EG+ PDTLTYN+LM AKYRL KL  FHRLL+EMGR+ FSPD HT+NILLHVLGK
Sbjct: 247 HQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNILLHVLGK 306

Query: 363 GDKPLAALNLLNHMKEVGIEASVLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCLPDVVC 542
           G+KP+AAL LLNHMKE+G + S+LHFTTLIDGLSRAGNLDAC YFF EM K G +PDVVC
Sbjct: 307 GNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEMIKNGFVPDVVC 366

Query: 543 YTVIITGFIVAGELETAQEYFTEMIVKGQVPN 638
           YTV+ITG+IVAGELE A+E F EMI +GQ+PN
Sbjct: 367 YTVMITGYIVAGELEKAREIFDEMIARGQLPN 398



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/205 (20%), Positives = 76/205 (37%)
 Frame = +3

Query: 15  TFNIVICTCGQAGLARKTVERFVKLKSFSYRPFKHSFNAILYSLLTVKQYKLIEWVYQQM 194
           T+NI++   G+       ++    +K   + P    F  ++  L          + + +M
Sbjct: 296 TYNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEM 355

Query: 195 LIEGHDPDTLTYNVLMVAKYRLRKLEQFHRLLEEMGRNRFSPDSHTFNILLHVLGKGDKP 374
           +  G  PD + Y V++       +LE+   + +EM                  + +G  P
Sbjct: 356 IKNGFVPDVVCYTVMITGYIVAGELEKAREIFDEM------------------IARGQLP 397

Query: 375 LAALNLLNHMKEVGIEASVLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCLPDVVCYTVI 554
                            +V  + ++I GL  AG  +  +    EM   GC P+ + Y  +
Sbjct: 398 -----------------NVFTYNSMIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNTL 440

Query: 555 ITGFIVAGELETAQEYFTEMIVKGQ 629
           +     AG+L  A+E   EM   GQ
Sbjct: 441 VNNLRNAGKLSEAREVIKEMAENGQ 465


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  329 bits (843), Expect = 3e-88
 Identities = 156/211 (73%), Positives = 184/211 (87%)
 Frame = +3

Query: 6   TARTFNIVICTCGQAGLARKTVERFVKLKSFSYRPFKHSFNAILYSLLTVKQYKLIEWVY 185
           TARTFNI+I TCG+AGLA+  VERF+K K+F++RPFKHS+NAIL+ LL + QYKLIEWVY
Sbjct: 190 TARTFNILIRTCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVY 249

Query: 186 QQMLIEGHDPDTLTYNVLMVAKYRLRKLEQFHRLLEEMGRNRFSPDSHTFNILLHVLGKG 365
           QQ+L++G   D LTYN++M AKYRL KL+QFHRLL+EMGRN FSPD HTFNILLHVLGKG
Sbjct: 250 QQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKG 309

Query: 366 DKPLAALNLLNHMKEVGIEASVLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCLPDVVCY 545
           DKPLAALNLLNHM+E+GIE +VLHFTTLIDGLSRAGNLDACKYFF EM K GC+PDVV Y
Sbjct: 310 DKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNGCIPDVVAY 369

Query: 546 TVIITGFIVAGELETAQEYFTEMIVKGQVPN 638
           TV+ITG++VAGE+E A + +  MI + QVPN
Sbjct: 370 TVMITGYVVAGEIEKALKMYQYMISREQVPN 400


>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  328 bits (841), Expect = 5e-88
 Identities = 157/211 (74%), Positives = 183/211 (86%)
 Frame = +3

Query: 6   TARTFNIVICTCGQAGLARKTVERFVKLKSFSYRPFKHSFNAILYSLLTVKQYKLIEWVY 185
           TARTFNI+I TCG+AGLA+  VERF+K K+F++RPFKHS+NAIL+ LL + QYKLIEWVY
Sbjct: 190 TARTFNILIRTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVY 249

Query: 186 QQMLIEGHDPDTLTYNVLMVAKYRLRKLEQFHRLLEEMGRNRFSPDSHTFNILLHVLGKG 365
           QQML++G   D LTYN++M AKYRL KL+QFHRLL+EMGRN FSPD HTFNILLHVLGKG
Sbjct: 250 QQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKG 309

Query: 366 DKPLAALNLLNHMKEVGIEASVLHFTTLIDGLSRAGNLDACKYFFTEMTKYGCLPDVVCY 545
           DKPLAALNLLNHM+E+GIE +VLHFTTLIDGLSRAGNLDACKYFF EM K  C PDVV Y
Sbjct: 310 DKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNECRPDVVAY 369

Query: 546 TVIITGFIVAGELETAQEYFTEMIVKGQVPN 638
           TV+ITG++VAGE+E A E + +MI + QVPN
Sbjct: 370 TVMITGYVVAGEIEKALEMYQDMISREQVPN 400