BLASTX nr result

ID: Cnidium21_contig00043682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043682
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   108   3e-22
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   106   2e-21
emb|CAJ65876.1| putative integrase [Cucumis melo]                     105   5e-21
emb|CAJ65870.1| putative integrase [Cucumis melo]                     103   2e-20
emb|CAJ65869.1| putative integrase [Cucumis melo]                     102   4e-20

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 4/96 (4%)
 Frame = +1

Query: 4    GMRKXXXXXXXXXXXXXRNKTSSLSLAGLLQPLPI----WEDISLDFVEGLPRSNGIDTV 171
            GM++             +NKTSSL+ AGLLQPLPI    WED+S+DFVEGLP+S G D++
Sbjct: 972  GMKQDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVSMDFVEGLPKSGGWDSI 1031

Query: 172  LVVVDRLSKYAHFVGLKLPYTALSVAQIFIQEVSPL 279
            LVVVDRLSKY HF+GL+ P++A +VAQ+FI+EV  L
Sbjct: 1032 LVVVDRLSKYGHFIGLRHPFSAATVAQVFIKEVVKL 1067


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/96 (59%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
 Frame = +1

Query: 4    GMRKXXXXXXXXXXXXXRNKTSSLSLAGLLQPLPI----WEDISLDFVEGLPRSNGIDTV 171
            GM+K             + KTS+LS AGLLQPLPI    WEDIS+DFVEGLP+S G DT+
Sbjct: 1136 GMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTI 1195

Query: 172  LVVVDRLSKYAHFVGLKLPYTALSVAQIFIQEVSPL 279
            LVVVDRLSKYAHF+ LK P+TA +VA +FI+E+  L
Sbjct: 1196 LVVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKL 1231


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/93 (59%), Positives = 66/93 (70%), Gaps = 4/93 (4%)
 Frame = +1

Query: 4   GMRKXXXXXXXXXXXXXRNKTSSLSLAGLLQPLPI----WEDISLDFVEGLPRSNGIDTV 171
           GM+K             +NKT +LS AGLLQPLPI    WEDIS+DFVEGLPRS G DT+
Sbjct: 1   GMKKDIKQYVDHCHVCQQNKTQALSPAGLLQPLPIPNRIWEDISMDFVEGLPRSKGFDTI 60

Query: 172 LVVVDRLSKYAHFVGLKLPYTALSVAQIFIQEV 270
           LVVVDRLSKYAHF+ L  P++A  VA +F++EV
Sbjct: 61  LVVVDRLSKYAHFITLGHPFSAKVVALVFVKEV 93


>emb|CAJ65870.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/93 (59%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
 Frame = +1

Query: 4   GMRKXXXXXXXXXXXXXRNKTSSLSLAGLLQPLPI----WEDISLDFVEGLPRSNGIDTV 171
           GM+K             +NK  +LS AGLLQPLPI    WEDIS+DFVEGLPRS G DT+
Sbjct: 1   GMKKDIKQYVDHCHVCQQNKIQALSPAGLLQPLPIPNRIWEDISMDFVEGLPRSKGFDTI 60

Query: 172 LVVVDRLSKYAHFVGLKLPYTALSVAQIFIQEV 270
           LVVVDRLSKYAHF+ L  P++A  VA +FI+EV
Sbjct: 61  LVVVDRLSKYAHFITLGHPFSAKVVALVFIKEV 93


>emb|CAJ65869.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
 Frame = +1

Query: 4   GMRKXXXXXXXXXXXXXRNKTSSLSLAGLLQPLPI----WEDISLDFVEGLPRSNGIDTV 171
           GM+K             +NKT +LS AGLLQPLPI    WEDIS+DFVEGLP S G DT+
Sbjct: 1   GMKKDIKQYVDHCHVCQQNKTQALSPAGLLQPLPIPNRIWEDISMDFVEGLPCSKGFDTI 60

Query: 172 LVVVDRLSKYAHFVGLKLPYTALSVAQIFIQEV 270
           LVVVDRLSKYAHF+ L  P++A  VA +F++EV
Sbjct: 61  LVVVDRLSKYAHFITLGHPFSAKVVALVFVKEV 93


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