BLASTX nr result

ID: Cnidium21_contig00043629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043629
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29821.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_002284232.1| PREDICTED: mitochondrial GTPase 1 isoform 2 ...   187   2e-45
ref|XP_002284228.1| PREDICTED: mitochondrial GTPase 1 isoform 1 ...   187   2e-45
ref|XP_002533440.1| GTP binding protein, putative [Ricinus commu...   173   2e-41
ref|XP_002308022.1| predicted protein [Populus trichocarpa] gi|2...   166   3e-39

>emb|CBI29821.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  187 bits (475), Expect = 2e-45
 Identities = 93/127 (73%), Positives = 108/127 (85%), Gaps = 2/127 (1%)
 Frame = +2

Query: 2   STPLHWRHINTRGLDE--NNSNDKNEYNVKDLLRNRRKPPNLSDVHYVEDVVTEVQRTLY 175
           STPLHWRH+N R ++E  N   DK++YN+KDLL N+RK PN SDV Y+ED+VTEVQ  L+
Sbjct: 230 STPLHWRHLNNRRIEELRNEYEDKHDYNLKDLLPNKRKLPNRSDVKYIEDLVTEVQCALH 289

Query: 176 VTLSEFDGDLDNENDLEILIAQQFEALQKALKIPNKASEARTMVSKKFLTLFRAGKLGPF 355
           VTLSEF+G+L+ ENDLE LI QQFE LQKA+KIP+KASEARTMVSKK LTLFR GKLGPF
Sbjct: 290 VTLSEFNGNLEEENDLESLIEQQFEKLQKAMKIPHKASEARTMVSKKLLTLFRTGKLGPF 349

Query: 356 ILDDVPD 376
           ILDDVPD
Sbjct: 350 ILDDVPD 356


>ref|XP_002284232.1| PREDICTED: mitochondrial GTPase 1 isoform 2 [Vitis vinifera]
          Length = 377

 Score =  187 bits (475), Expect = 2e-45
 Identities = 93/127 (73%), Positives = 108/127 (85%), Gaps = 2/127 (1%)
 Frame = +2

Query: 2   STPLHWRHINTRGLDE--NNSNDKNEYNVKDLLRNRRKPPNLSDVHYVEDVVTEVQRTLY 175
           STPLHWRH+N R ++E  N   DK++YN+KDLL N+RK PN SDV Y+ED+VTEVQ  L+
Sbjct: 245 STPLHWRHLNNRRIEELRNEYEDKHDYNLKDLLPNKRKLPNRSDVKYIEDLVTEVQCALH 304

Query: 176 VTLSEFDGDLDNENDLEILIAQQFEALQKALKIPNKASEARTMVSKKFLTLFRAGKLGPF 355
           VTLSEF+G+L+ ENDLE LI QQFE LQKA+KIP+KASEARTMVSKK LTLFR GKLGPF
Sbjct: 305 VTLSEFNGNLEEENDLESLIEQQFEKLQKAMKIPHKASEARTMVSKKLLTLFRTGKLGPF 364

Query: 356 ILDDVPD 376
           ILDDVPD
Sbjct: 365 ILDDVPD 371


>ref|XP_002284228.1| PREDICTED: mitochondrial GTPase 1 isoform 1 [Vitis vinifera]
          Length = 376

 Score =  187 bits (475), Expect = 2e-45
 Identities = 93/127 (73%), Positives = 108/127 (85%), Gaps = 2/127 (1%)
 Frame = +2

Query: 2   STPLHWRHINTRGLDE--NNSNDKNEYNVKDLLRNRRKPPNLSDVHYVEDVVTEVQRTLY 175
           STPLHWRH+N R ++E  N   DK++YN+KDLL N+RK PN SDV Y+ED+VTEVQ  L+
Sbjct: 244 STPLHWRHLNNRRIEELRNEYEDKHDYNLKDLLPNKRKLPNRSDVKYIEDLVTEVQCALH 303

Query: 176 VTLSEFDGDLDNENDLEILIAQQFEALQKALKIPNKASEARTMVSKKFLTLFRAGKLGPF 355
           VTLSEF+G+L+ ENDLE LI QQFE LQKA+KIP+KASEARTMVSKK LTLFR GKLGPF
Sbjct: 304 VTLSEFNGNLEEENDLESLIEQQFEKLQKAMKIPHKASEARTMVSKKLLTLFRTGKLGPF 363

Query: 356 ILDDVPD 376
           ILDDVPD
Sbjct: 364 ILDDVPD 370


>ref|XP_002533440.1| GTP binding protein, putative [Ricinus communis]
           gi|223526714|gb|EEF28947.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 375

 Score =  173 bits (439), Expect = 2e-41
 Identities = 88/129 (68%), Positives = 107/129 (82%), Gaps = 2/129 (1%)
 Frame = +2

Query: 5   TPLHWRHINTRGLD--ENNSNDKNEYNVKDLLRNRRKPPNLSDVHYVEDVVTEVQRTLYV 178
           TPLHWRH N R +D  + NS DK+E N+KDL   R++PPNLSDV YVED+VTEVQ +LY 
Sbjct: 246 TPLHWRHWNNRKMDGIKYNSQDKHECNLKDLRPKRKRPPNLSDVLYVEDMVTEVQCSLYK 305

Query: 179 TLSEFDGDLDNENDLEILIAQQFEALQKALKIPNKASEARTMVSKKFLTLFRAGKLGPFI 358
           TL+EF+G++++ENDLE LI QQF  LQKALKIP+KASEAR MVSKKFLTLFR GKLG FI
Sbjct: 306 TLAEFNGNVEDENDLENLIEQQFAVLQKALKIPHKASEARLMVSKKFLTLFRTGKLGHFI 365

Query: 359 LDDVPDVSA 385
           LD+VP+ ++
Sbjct: 366 LDNVPETNS 374


>ref|XP_002308022.1| predicted protein [Populus trichocarpa] gi|222853998|gb|EEE91545.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  166 bits (421), Expect = 3e-39
 Identities = 84/128 (65%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
 Frame = +2

Query: 5   TPLHWRHINTRGLD--ENNSNDKNEYNVKDLLRNRRKPPNLSDVHYVEDVVTEVQRTLYV 178
           TPLHW+H N R +D     S +K++Y+ KDL  N RKPP++SDV YVE++VTEVQ  +Y 
Sbjct: 246 TPLHWKHWNNRKMDGIRYESEEKHKYDPKDLRPNMRKPPSVSDVVYVENLVTEVQCAMYK 305

Query: 179 TLSEFDGDLDNENDLEILIAQQFEALQKALKIPNKASEARTMVSKKFLTLFRAGKLGPFI 358
           TL+EF+G++++ENDLE LI QQFE LQKALKIP+KASEAR MVSKKFLTLFR GKLG FI
Sbjct: 306 TLAEFNGNVEDENDLENLIEQQFEVLQKALKIPHKASEARLMVSKKFLTLFRTGKLGCFI 365

Query: 359 LDDVPDVS 382
           LDDVP+ +
Sbjct: 366 LDDVPETN 373


Top