BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043607
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subc...    72   4e-11
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                   72   6e-11
gb|AAQ56293.1| putative gag-pol precursor [Oryza sativa Japonica...    72   6e-11
gb|AAT94049.1| putative polyprotein [Oryza sativa Japonica Group]      71   8e-11
gb|AAL67586.1|AC018929_8 putative GAG-POL precursor [Oryza sativ...    71   1e-10

>gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1498

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = +1

Query: 1    FQVGDLVLRELATSMPTKQGKLMPNWEGPYTVVEVVRPGTYKLSHPDGGLIKNTWHAARL 180
            F VGDLVLR++ T+    + KL P WEGP+ + EV RPG+Y+L H DG +I N+W+   L
Sbjct: 1436 FLVGDLVLRKIQTTQD--RHKLSPLWEGPFIIAEVTRPGSYRLKHEDGTIINNSWNIEHL 1493

Query: 181  RCFY 192
            R FY
Sbjct: 1494 RRFY 1497


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = +1

Query: 7    VGDLVLRELATSMPTKQGKLMPNWEGPYTVVEVVRPGTYKLSHPDGGLIKNTWHAARLRC 186
            VGDLVLR++ +   T + KL P WEGPYTVVEV RPG+ +L+  DG ++ N+W+  +LR 
Sbjct: 2037 VGDLVLRKIQSQ--TNRNKLSPKWEGPYTVVEVTRPGSVRLAMSDGQILSNSWNIDQLRK 2094

Query: 187  FY 192
            FY
Sbjct: 2095 FY 2096


>gb|AAQ56293.1| putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 1311

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = +1

Query: 1    FQVGDLVLRELATSMPTKQGKLMPNWEGPYTVVEVVRPGTYKLSHPDGGLIKNTWHAARL 180
            F VGDLVLR++ T+    Q KL P WEGP+ + EV RPG+Y+L   DG LI N+W+   L
Sbjct: 1249 FLVGDLVLRKIQTTQD--QHKLSPLWEGPFIIAEVTRPGSYRLKREDGTLINNSWNIEHL 1306

Query: 181  RCFY 192
            R FY
Sbjct: 1307 RRFY 1310


>gb|AAT94049.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1844

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = +1

Query: 1    FQVGDLVLRELATSMPTKQGKLMPNWEGPYTVVEVVRPGTYKLSHPDGGLIKNTWHAARL 180
            F VGDLVLR++ T+    + KL P WEGP+ + EV RPG+Y+L H DG L+ N+W+   L
Sbjct: 1782 FLVGDLVLRKIQTTRD--RHKLSPLWEGPFIISEVTRPGSYRLKHEDGTLVDNSWNIEHL 1839

Query: 181  RCFY 192
            R FY
Sbjct: 1840 RRFY 1843


>gb|AAL67586.1|AC018929_8 putative GAG-POL precursor [Oryza sativa Japonica Group]
            gi|31433656|gb|AAP55140.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1099

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/64 (51%), Positives = 43/64 (67%)
 Frame = +1

Query: 1    FQVGDLVLRELATSMPTKQGKLMPNWEGPYTVVEVVRPGTYKLSHPDGGLIKNTWHAARL 180
            F VGDLVLR++ T+    Q KL P WEGP+ + EV RPG+Y+L   DG +I N+W+   L
Sbjct: 1037 FLVGDLVLRKIQTTQD--QHKLSPLWEGPFIIAEVTRPGSYRLKREDGTIINNSWNIEHL 1094

Query: 181  RCFY 192
            R FY
Sbjct: 1095 RRFY 1098