BLASTX nr result

ID: Cnidium21_contig00043601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043601
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512616.1| interferon-induced GTP-binding protein mx, p...   110   9e-23
ref|XP_003629867.1| Interferon-induced GTP-binding protein Mx [M...   103   1e-20
ref|XP_002523968.1| interferon-induced GTP-binding protein mx, p...   102   3e-20
ref|XP_002330710.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002304085.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>ref|XP_002512616.1| interferon-induced GTP-binding protein mx, putative [Ricinus
           communis] gi|223548577|gb|EEF50068.1| interferon-induced
           GTP-binding protein mx, putative [Ricinus communis]
          Length = 675

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/97 (58%), Positives = 70/97 (72%)
 Frame = -3

Query: 317 AFDLKCRTTAYWNIVLKRMVDCIALQLMLSIQRFANGEMEAEIVNEVMDTKKGGIERLLI 138
           AFDLK R TAYW IV++R+VD +AL L  SIQ   N EME EI++E+M +  G IE+LL 
Sbjct: 577 AFDLKMRMTAYWKIVMRRLVDSMALHLQFSIQNLVNKEMEREIISELMGSHSGEIEKLLE 636

Query: 137 EMPFIAANRERLNKSISLLEESRVVLAKIMDKIAVAD 27
           E P +A+ RE+LN SI LL ES+ VLA IMDKIA  D
Sbjct: 637 ETPSVASKREKLNTSIELLRESKKVLADIMDKIATYD 673


>ref|XP_003629867.1| Interferon-induced GTP-binding protein Mx [Medicago truncatula]
           gi|355523889|gb|AET04343.1| Interferon-induced
           GTP-binding protein Mx [Medicago truncatula]
          Length = 678

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/97 (50%), Positives = 69/97 (71%)
 Frame = -3

Query: 317 AFDLKCRTTAYWNIVLKRMVDCIALQLMLSIQRFANGEMEAEIVNEVMDTKKGGIERLLI 138
           AFDLK R  AYW IVL+R++D IAL LMLSI    N +++ EI N+++    GGIERLL 
Sbjct: 582 AFDLKARMIAYWKIVLRRLIDSIALHLMLSINELINNDLQKEICNDLLSPSGGGIERLLE 641

Query: 137 EMPFIAANRERLNKSISLLEESRVVLAKIMDKIAVAD 27
           E P I+  RE+L++S+ +L ES+  +A+IMD+I + D
Sbjct: 642 ESPSISGKREKLSRSVKVLRESKETVARIMDRIGIYD 678


>ref|XP_002523968.1| interferon-induced GTP-binding protein mx, putative [Ricinus
           communis] gi|223536695|gb|EEF38336.1| interferon-induced
           GTP-binding protein mx, putative [Ricinus communis]
          Length = 667

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/93 (58%), Positives = 66/93 (70%)
 Frame = -3

Query: 317 AFDLKCRTTAYWNIVLKRMVDCIALQLMLSIQRFANGEMEAEIVNEVMDTKKGGIERLLI 138
           AFDL+ R  AYW IVL R+VD +AL L  S+Q   N EME EIVNEVM  + G IERLL 
Sbjct: 570 AFDLRMRMVAYWKIVLWRLVDGMALHLKHSVQNLVNTEMEKEIVNEVMGAEAGAIERLLE 629

Query: 137 EMPFIAANRERLNKSISLLEESRVVLAKIMDKI 39
           E P +A  RE+L  SI +L+ES+ VL++IMDKI
Sbjct: 630 ESPSVAGKREKLKASIKVLKESKEVLSEIMDKI 662


>ref|XP_002330710.1| predicted protein [Populus trichocarpa] gi|222872314|gb|EEF09445.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
 Frame = -3

Query: 317 AFDLKCRTTAYWNIVLKRMVDCIALQLMLSIQRFANGEMEAEIVNEVMDTKKG-GIERLL 141
           AFDLK R  AYW IVL R+VD +AL L LSI+   N EME EIVNE++ T  G  IE+L 
Sbjct: 538 AFDLKMRLIAYWKIVLIRLVDNMALHLQLSIRNLVNKEMEKEIVNELLGTGGGVAIEKLF 597

Query: 140 IEMPFIAANRERLNKSISLLEESRVVLAKIMDKIAVA 30
           +E P +A+ RE+LN SI LL ES+ V+A IMD+IA A
Sbjct: 598 VESPSVASKREKLNTSIKLLRESQEVMANIMDEIASA 634


>ref|XP_002304085.1| predicted protein [Populus trichocarpa] gi|222841517|gb|EEE79064.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/94 (56%), Positives = 64/94 (68%)
 Frame = -3

Query: 317 AFDLKCRTTAYWNIVLKRMVDCIALQLMLSIQRFANGEMEAEIVNEVMDTKKGGIERLLI 138
           AFDLK R TAYW IVL+R+VD +AL L   ++   N EME EIV E++    G IER+L 
Sbjct: 160 AFDLKMRMTAYWKIVLRRLVDFMALHLQFCVRNLVNKEMEEEIVQELVGRHDGAIERMLE 219

Query: 137 EMPFIAANRERLNKSISLLEESRVVLAKIMDKIA 36
           E P +AA R++LN SI LL ES  VL  IMDKIA
Sbjct: 220 ESPAVAAKRDKLNASIKLLRESNNVLGNIMDKIA 253


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