BLASTX nr result

ID: Cnidium21_contig00043591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043591
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523906.1| RNA-binding region-containing protein, putat...   124   6e-27
emb|CBI31519.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|1...   116   2e-24
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...   113   1e-23

>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   ADHVNYNHKLGYTSGSYMNGHYSQVYLGQPMMGTANTLMPMYPFYHFQQTQAMGLPAHYY 181
           A  ++YNHKL YT GSYMNGH+SQVY GQ +MG ANTLMPMYP YHF Q+Q MGLPAH +
Sbjct: 167 ATDISYNHKLSYTGGSYMNGHFSQVYPGQAIMG-ANTLMPMYPLYHFHQSQTMGLPAHIF 225

Query: 182 SPTAT--ITTGPALMSKPTSIPPNPVCLTAE 268
             T    ITT P +MSKP SI P+PVCL  E
Sbjct: 226 PQTTAGPITTVPTIMSKPPSIAPSPVCLAVE 256


>emb|CBI31519.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   ADHVNYNHKLGYTSGSYMNGHYSQVYLGQPMMGTANTLMPMYPFYHFQQTQAMGLPAHYY 181
           A  ++YNHKL YT GSYMNGH+SQVY GQ M+G AN LMPMYPFYHF Q+Q MG PAH +
Sbjct: 127 AADISYNHKLSYTGGSYMNGHFSQVYPGQAMVG-ANALMPMYPFYHFHQSQTMGHPAHMF 185

Query: 182 SPTAT--ITTGPALMSKPTSIPPNPVCLTAE 268
            PT    + T PA++SKPTS+ PN VCL  E
Sbjct: 186 PPTTVGPMPTVPAIISKPTSMAPNTVCLAVE 216


>ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2   ADHVNYNHKLGYTSGSYMNGHYSQVYLGQPMMGTANTLMPMYPFYHFQQTQAMGLPAHYY 181
           A  ++YNHKL YT GSYMNGH+SQVY GQ M+G ANTLMPMYP YHF Q+QA+GLPA + 
Sbjct: 160 ATDISYNHKLSYTGGSYMNGHFSQVYPGQAMVG-ANTLMPMYPLYHFHQSQAVGLPAAHI 218

Query: 182 SPTAT---ITTGPALMSKPTSI-PPNPVCLTAE 268
            P  T   +TT P +MSKP SI PPN VCL  E
Sbjct: 219 FPPNTAGPMTTVPTIMSKPPSIAPPNAVCLAVE 251


>ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1|
           unknown [Populus trichocarpa]
           gi|222864314|gb|EEF01445.1| predicted protein [Populus
           trichocarpa]
          Length = 253

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/87 (68%), Positives = 67/87 (77%), Gaps = 4/87 (4%)
 Frame = +2

Query: 20  NHKLGYTSGSYMNGHYSQVYLGQPMMGTANTLMPMYPFYHFQQTQAMGLP-AHYYSPTAT 196
           NHKL YT GSYMNGH+SQVY GQ M+G ANTLMPMYPFYHF Q+QAMGLP AH + PT  
Sbjct: 168 NHKLNYTGGSYMNGHFSQVYPGQAMVG-ANTLMPMYPFYHFHQSQAMGLPAAHIFPPTTA 226

Query: 197 --ITTGPALMSKPTSI-PPNPVCLTAE 268
             +TT P +MSKP SI PP+ VCL  E
Sbjct: 227 GPMTTVPTIMSKPPSIAPPSAVCLAVE 253


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   ADHVNYNHKLGYTSGSYMNGHYSQVYLGQPMMGTANTLMPMYPFYHFQQTQAMGLPAHYY 181
           A  ++YNHKL YT GSYMNGH+SQVY GQ M+G AN LMPMYPFYHF Q+Q MG PAH +
Sbjct: 158 AADISYNHKLSYTGGSYMNGHFSQVYPGQAMVG-ANALMPMYPFYHFHQSQTMGHPAHMF 216

Query: 182 SPTAT--ITTGPALMSKPTSIPPN 247
            PT    + T PA++SKPTS+ PN
Sbjct: 217 PPTTVGPMPTVPAIISKPTSMAPN 240


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