BLASTX nr result

ID: Cnidium21_contig00043590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043590
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521786.1| Disease resistance protein RPP13, putative [...    66   5e-09
gb|AAQ63701.1| disease resistance protein-like [Elaeis oleifera]       64   1e-08
gb|AEJ72566.1| putative CC-NBS-LRR protein [Malus x domestica]         62   9e-08
ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trich...    60   3e-07
ref|XP_003595124.1| Disease resistance RPP8-like protein [Medica...    57   2e-06

>ref|XP_002521786.1| Disease resistance protein RPP13, putative [Ricinus communis]
            gi|223538999|gb|EEF40596.1| Disease resistance protein
            RPP13, putative [Ricinus communis]
          Length = 929

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
 Frame = +3

Query: 3    NLRNLGTLDLRV-SSKITIPNVLWKLKMLKHLYLPEFFEGGSTDKLSFAGLNELELIYNY 179
            NLR L TLDL   +S + IPNV+ K++ L+HLYLPE   G  +D+   A L+ L+ + N+
Sbjct: 650  NLRYLQTLDLLTWNSTVRIPNVICKMQRLRHLYLPESC-GDDSDRWQLANLSNLQTLVNF 708

Query: 180  NTKYCDAHDLLPLP---KLKVFDGGIILEDNLAEEVVDYIESRKFVSS-------VFEGE 329
              + CD  DLL L    KL + D    L         +++ES  FVS+       +  G 
Sbjct: 709  PAEKCDIRDLLSLTNLRKLVIDDPNFGLIFRSPGTSFNHLESLSFVSNEDYTLVQIITGC 768

Query: 330  GGGQRL-----ISILSKYHH--DTVGSENLTGE--------TSQPTPSLYV*VCVWEK-- 458
                +L     I  L + H     +   NL G         T +  P+L +     +   
Sbjct: 769  PNLYKLHIEGQIEKLPECHQFSSNLAKLNLQGSKLLEDPMMTLEKLPNLRILRLQMDSFL 828

Query: 459  ---RRLFGYWFPQLQ*LILFELPGLKKWRVDD*DMLN 560
                      FPQL+ L+L +LP L+ W+V++  M N
Sbjct: 829  GTLMVCSDKGFPQLKSLLLCDLPNLEDWKVEEGAMSN 865


>gb|AAQ63701.1| disease resistance protein-like [Elaeis oleifera]
          Length = 220

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = +3

Query: 3   NLRNLGTLDLRVSSKITIPNVLWKLKMLKHLYLPEFFEGGSTD-KLSFAGLNELELIYNY 179
           +LR L TLDLRV  +I IPNVLWKL+ L+HLYLP  ++ G  D KL    L+ L  + N 
Sbjct: 75  DLRYLLTLDLRVQDEILIPNVLWKLRRLRHLYLPRKYKIGKRDGKLHLHALSYLMTLENV 134

Query: 180 NTKYCDAHDLLPL---PKLKVFDG 242
           N       DLL L    +L V DG
Sbjct: 135 NMSTLREQDLLELSNISRLSVVDG 158


>gb|AEJ72566.1| putative CC-NBS-LRR protein [Malus x domestica]
          Length = 968

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
 Frame = +3

Query: 3   NLRNLGTLDLRVSSKIT------IPNVLWKLKMLKHLYLPEFFEGGSTDKLSFAGLNELE 164
           NL +L TL+L+  SK++      IPNV+WK++ L+HLYLP++  G + DKL    L  L+
Sbjct: 680 NLIHLKTLNLQTISKLSWDLTVQIPNVIWKMERLRHLYLPKWC-GNAVDKLQLGNLINLQ 738

Query: 165 LIYNYNTKYCDAHDLLPLPKLK 230
            + N+    CD  DL  L  L+
Sbjct: 739 TLVNFPANKCDVEDLRKLTNLR 760


>ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222837129|gb|EEE75508.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 605

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   NLRNLGTLDLRV-SSKITIPNVLWKLKMLKHLYLPEFFEGGSTDKLSFAGLNELELIYNY 179
           NLR L TLDL   +S + IPNV+W+L  L+HLYLPE   G  + K   A L  L+ + N+
Sbjct: 500 NLRYLQTLDLLTWNSTVQIPNVVWRLHRLRHLYLPESC-GEYSYKWELANLVNLQTLVNF 558

Query: 180 NTKYCDAHDLLPLPKLKVFDGGIILEDNLAEEVVDYIESRKFV 308
             + C+  DL+ L  LK     ++++D +  + + +I S K +
Sbjct: 559 PAEKCEITDLVRLNHLK----KLVIDDPILPDQLSHIPSCKIL 597


>ref|XP_003595124.1| Disease resistance RPP8-like protein [Medicago truncatula]
            gi|355484172|gb|AES65375.1| Disease resistance RPP8-like
            protein [Medicago truncatula]
          Length = 928

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
 Frame = +3

Query: 3    NLRNLGTLDLRV-SSKITIPNVLWKLKMLKHLYLPEFFEGGSTDKLSFAGLNELELIYNY 179
            NL+ L TLDL   +S + IPNV+  ++ L+HLYLPE   G   +K   + L  L+ + N+
Sbjct: 649  NLKCLQTLDLLTGNSTVQIPNVIGNMEKLRHLYLPESC-GNGIEKWQLSNLKNLQTLVNF 707

Query: 180  NTKYCDAHDLLPLPKLK--VFD----GGIILEDNLAEEVVDYIESRKFVS----SVFEGE 329
              + CD  DL+ L  L+  V D    G I    N+     +++ES  +VS    S+ E  
Sbjct: 708  PAEKCDVKDLMKLTSLRKLVIDDPNYGDIFKSTNV---TFNHLESLFYVSSEDISILEVS 764

Query: 330  GGGQRLI---------------SILSKYHHDTVGSENLTGE---TSQPTPS-----LYV* 440
             G   L                 I SK     +    L  +   T +  P+     L + 
Sbjct: 765  AGCPNLYKLHIEGPISNLPQPNQISSKLAKLKLQGSGLVADPMTTLEKLPNLRLLELQLD 824

Query: 441  VCVWEKRRLFGYWFPQLQ*LILFELPGLKKWRVD 542
              + ++       FPQL+ L+L +L  L++W+V+
Sbjct: 825  SFLGKQMVCSSKGFPQLRSLVLSDLSNLEQWKVE 858


Top