BLASTX nr result

ID: Cnidium21_contig00043577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043577
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33476.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|XP_002305215.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06

>emb|CBI33476.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/102 (34%), Positives = 46/102 (45%)
 Frame = +1

Query: 1   HNHIKKKSSNMGIDSITHKPLLPHPPTDNDHYNXXXXXXXXXXXXXHDQHKGKGINNETP 180
           + HIKKK   MGID +THKPL+P                         +   K   +ETP
Sbjct: 109 NTHIKKKLKKMGIDPLTHKPLIPAATAQPQQQQ-----------CQQKEEMEKTKESETP 157

Query: 181 LSVESIIPNDDNLHLAVGNLTIDTGFSVDEIPLIQPHEILIP 306
                       L  ++ ++ I  GF  DE+PLIQPHEIL+P
Sbjct: 158 ------------LESSINSMEIMNGFCTDEVPLIQPHEILVP 187


>ref|XP_002305215.1| predicted protein [Populus trichocarpa] gi|222848179|gb|EEE85726.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
 Frame = +1

Query: 1   HNHIKKKSSNMGIDSITHKPLL-----PHPPTDNDHYNXXXXXXXXXXXXXHDQHKGKGI 165
           + HIKKK   MGID +THKPL      P PP                            I
Sbjct: 109 NTHIKKKLRKMGIDPLTHKPLSAIETPPPPPPPQQEVQVQNSIQELEQQAGRQSSSTNDI 168

Query: 166 -----NNETPLSVESIIPNDDNLHLAVGNLTID--TGFSVDEIPLIQPHEILIP 306
                NNE   S++S    D+  ++     T++   GF  DE+PLI+PHE+L+P
Sbjct: 169 SELGQNNEPETSLQSARTQDEENNIGSTYDTMERMNGFCTDEVPLIEPHEMLVP 222


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