BLASTX nr result

ID: Cnidium21_contig00043565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043565
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       181   4e-44
emb|CBI28269.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   172   2e-41
ref|XP_002312830.1| transcription factor E2F [Populus trichocarp...   165   4e-39
ref|XP_002328241.1| transcription factor E2F [Populus trichocarp...   163   1e-38

>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  181 bits (460), Expect = 4e-44
 Identities = 96/156 (61%), Positives = 114/156 (73%), Gaps = 5/156 (3%)
 Frame = -3

Query: 453 LRSTMGPIDVYLVSQFEEKFEEINGVEAPLSIPPASPGITECQVTIVAPEESRENATDMQ 274
           LRSTMGPIDVYLVSQFEEKFEEI+G E P SIP  S G  E   T  A EE+R++ T MQ
Sbjct: 303 LRSTMGPIDVYLVSQFEEKFEEISGAEPPPSIPSTS-GYNE-DTTTAAKEENRDDETKMQ 360

Query: 273 GQETRTICPNENESHDIVNGIMKIVPDVNNDEDYWLSTDAEVSITDMWRIESGVEWNELE 94
           GQET  IC + N   D V+GIMKIVP+V++D DYWL +DA+VSITDMWR +SGVEWNEL 
Sbjct: 361 GQETHRICSDANAQQDFVSGIMKIVPEVDSDADYWLLSDADVSITDMWRTDSGVEWNELG 420

Query: 93  PLHEDFLMASVST-----PPPLRPDELPSSPNTTGR 1
            +HED+ +A+V T     PPP   + LP+  NTTGR
Sbjct: 421 TIHEDYTVANVGTPQPQSPPPSATEVLPT--NTTGR 454


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  172 bits (437), Expect = 2e-41
 Identities = 91/156 (58%), Positives = 112/156 (71%), Gaps = 5/156 (3%)
 Frame = -3

Query: 453 LRSTMGPIDVYLVSQFEEKFEEINGVEAPLSIPPASPGITECQVTIVAPEESRENATDMQ 274
           LRS+MGPIDVYLVSQFEEKFEEING+EAP S P +S G  E     +  EESR    ++Q
Sbjct: 292 LRSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSS-GYNEDPTAAMVTEESRGKEIEIQ 350

Query: 273 GQETRTICPNENESHDIVNGIMKIVP-DVNNDEDYWLSTDAEVSITDMWRIESGVEWNEL 97
           GQ+   +  + N S D V+GIMKIVP DV++D DYWL +DA+VSITDMWR E GVEWNEL
Sbjct: 351 GQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNEL 410

Query: 96  EPLHEDFLMASVSTPPPLRPD----ELPSSPNTTGR 1
           + L++D+ MA+VSTP P  P     E+P + NT GR
Sbjct: 411 DALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPGR 446


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  172 bits (437), Expect = 2e-41
 Identities = 91/156 (58%), Positives = 112/156 (71%), Gaps = 5/156 (3%)
 Frame = -3

Query: 453 LRSTMGPIDVYLVSQFEEKFEEINGVEAPLSIPPASPGITECQVTIVAPEESRENATDMQ 274
           LRS+MGPIDVYLVSQFEEKFEEING+EAP S P +S G  E     +  EESR    ++Q
Sbjct: 303 LRSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSS-GYNEDPTAAMVTEESRGKEIEIQ 361

Query: 273 GQETRTICPNENESHDIVNGIMKIVP-DVNNDEDYWLSTDAEVSITDMWRIESGVEWNEL 97
           GQ+   +  + N S D V+GIMKIVP DV++D DYWL +DA+VSITDMWR E GVEWNEL
Sbjct: 362 GQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNEL 421

Query: 96  EPLHEDFLMASVSTPPPLRPD----ELPSSPNTTGR 1
           + L++D+ MA+VSTP P  P     E+P + NT GR
Sbjct: 422 DALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPGR 457


>ref|XP_002312830.1| transcription factor E2F [Populus trichocarpa]
           gi|222849238|gb|EEE86785.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 473

 Score =  165 bits (417), Expect = 4e-39
 Identities = 88/152 (57%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
 Frame = -3

Query: 450 RSTMGPIDVYLVSQFEEKFEEINGVEAPLSIPPASPGITECQVTIVAPEESRENATDMQG 271
           RSTMGPIDVYLVSQFEEKFE+I G E P S    S G  E   T +  EESR    +MQ 
Sbjct: 321 RSTMGPIDVYLVSQFEEKFEDIQGAEPPPSDSSTS-GFNENAATTMVTEESRAKEFEMQE 379

Query: 270 QETRTICPNENESHDIVNGIMKIVP-DVNNDEDYWLSTDAEVSITDMWRIESGVEWNELE 94
           Q+   IC   N SHD V+GIMKIVP DVN+D DYWL +DA+VSITDMWR E  VEWN+L+
Sbjct: 380 QDGHRICSEPNTSHDFVSGIMKIVPSDVNSDADYWLLSDADVSITDMWRNEPVVEWNDLD 439

Query: 93  PLHEDFLMASVSTP---PPLRPDELPSSPNTT 7
            LH D++M + STP    P  P E+P + NTT
Sbjct: 440 TLHNDYVMPNFSTPQPQTPSNPTEVPPAANTT 471


>ref|XP_002328241.1| transcription factor E2F [Populus trichocarpa]
           gi|222837756|gb|EEE76121.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 455

 Score =  163 bits (413), Expect = 1e-38
 Identities = 87/154 (56%), Positives = 103/154 (66%), Gaps = 5/154 (3%)
 Frame = -3

Query: 453 LRSTMGPIDVYLVSQFEEKFEEINGVEAPLSIPPASPGITECQVTIVAPEESRENATDMQ 274
           LRSTMGPIDVYLVSQFEEK E+I GVE P S P  S G  E   T +  EESR    +MQ
Sbjct: 301 LRSTMGPIDVYLVSQFEEKIEDIQGVEPPPSYPSTS-GFNENPATTMTMEESRGKEVEMQ 359

Query: 273 GQETRTICPNENESHDIVNGIMKIVP-DVNNDEDYWLSTDAEVSITDMWRIESGVEWNEL 97
            Q+   +C   N +HD V+GIMKIVP DV++D DYWL +D  VSITDMWR E  VEWN+L
Sbjct: 360 EQDGHRMCSELNTAHDFVSGIMKIVPSDVDSDADYWLLSDPGVSITDMWRNEPVVEWNDL 419

Query: 96  EPLHEDFLMASVSTP----PPLRPDELPSSPNTT 7
           + LH D++M +V TP    PP  P E+P   NTT
Sbjct: 420 DTLHNDYVMPNVCTPQPQTPPSNPTEVPPGTNTT 453


Top