BLASTX nr result
ID: Cnidium21_contig00043548
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00043548 (361 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicu... 62 5e-08 ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana] ... 60 1e-07 gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pek... 60 1e-07 ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arab... 60 1e-07 ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicu... 60 2e-07 >ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum] gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum] Length = 747 Score = 62.0 bits (149), Expect = 5e-08 Identities = 27/31 (87%), Positives = 28/31 (90%) Frame = -1 Query: 361 HGGFSVPHRVAEDCFAPLDYREHRPSQELVA 269 HGGFSVP R AEDCFAPLDYR+ RPSQELVA Sbjct: 172 HGGFSVPRRAAEDCFAPLDYRQQRPSQELVA 202 >ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana] gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4 gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana] gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana] gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana] gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana] gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana] gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana] Length = 788 Score = 60.5 bits (145), Expect = 1e-07 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = -1 Query: 361 HGGFSVPHRVAEDCFAPLDYREHRPSQELVA 269 HGGFSVP R AEDCFAPLDY++ RPSQEL+A Sbjct: 189 HGGFSVPRRAAEDCFAPLDYKQQRPSQELIA 219 >gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis] Length = 758 Score = 60.5 bits (145), Expect = 1e-07 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = -1 Query: 361 HGGFSVPHRVAEDCFAPLDYREHRPSQELVA 269 HGGFSVP R AEDCFAPLDY++ RPSQEL+A Sbjct: 177 HGGFSVPRRAAEDCFAPLDYKQQRPSQELIA 207 >ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp. lyrata] gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp. lyrata] Length = 791 Score = 60.5 bits (145), Expect = 1e-07 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = -1 Query: 361 HGGFSVPHRVAEDCFAPLDYREHRPSQELVA 269 HGGFSVP R AEDCFAPLDY++ RPSQEL+A Sbjct: 184 HGGFSVPRRAAEDCFAPLDYKQQRPSQELIA 214 >ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum] gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum] Length = 811 Score = 59.7 bits (143), Expect = 2e-07 Identities = 25/31 (80%), Positives = 27/31 (87%) Frame = -1 Query: 361 HGGFSVPHRVAEDCFAPLDYREHRPSQELVA 269 HGGFSVP R AEDCF PLDY+E RPSQEL+A Sbjct: 188 HGGFSVPRRAAEDCFPPLDYKEQRPSQELIA 218