BLASTX nr result

ID: Cnidium21_contig00043464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043464
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301542.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002273071.2| PREDICTED: uncharacterized protein LOC100257...   178   5e-43
emb|CBI37016.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_003626031.1| WD repeat-containing protein [Medicago trunc...   174   7e-42
ref|XP_002515207.1| nucleotide binding protein, putative [Ricinu...   160   8e-38

>ref|XP_002301542.1| predicted protein [Populus trichocarpa] gi|222843268|gb|EEE80815.1|
           predicted protein [Populus trichocarpa]
          Length = 1455

 Score =  182 bits (462), Expect = 2e-44
 Identities = 95/162 (58%), Positives = 116/162 (71%), Gaps = 8/162 (4%)
 Frame = -2

Query: 464 FNHWVLDVCFLED-AISSSSKSKQCLAIGCSDNTVCFWDMSRSSSSFEVKSPERCLLYSM 288
           F HWVLDV F ++ A+SSS + +QCLAIGCSDN+V  WDMS SS   +V+SPERCLLYSM
Sbjct: 128 FTHWVLDVSFFKNSAVSSSQEERQCLAIGCSDNSVHLWDMSVSSVVLQVQSPERCLLYSM 187

Query: 287 KMRGEQIEALHIASGTIYNEIIVWKVVFPNLSNPGKEPVNLTSLD-------HEAPQYRF 129
           ++ G+ +E L IASGTI+NEIIVWKVV       G    +L   D        ++ Q RF
Sbjct: 188 RLWGDSLETLRIASGTIFNEIIVWKVVPVEPQLGGLPSTSLLEDDMYLSCSLPDSSQLRF 247

Query: 128 HQLEAVAVCKLAGHEGSIFNLAWSSDGSKLVSVSDDRSARIW 3
            Q ++  +C+L GHEGSIF +AWSSDGSKLVSVSDDRSARIW
Sbjct: 248 QQHKSAHMCRLIGHEGSIFRIAWSSDGSKLVSVSDDRSARIW 289


>ref|XP_002273071.2| PREDICTED: uncharacterized protein LOC100257191 [Vitis vinifera]
          Length = 1404

 Score =  178 bits (451), Expect = 5e-43
 Identities = 91/159 (57%), Positives = 118/159 (74%), Gaps = 5/159 (3%)
 Frame = -2

Query: 464 FNHWVLDVCFLEDAISSSSKSKQCLAIGCSDNTVCFWDMSRSSSSFEVKSPERCLLYSMK 285
           F+HWVLDVCF ++ I++SS    CL +GCSDN+V  WDM  SSS  EV++PERCLLYSM+
Sbjct: 128 FSHWVLDVCFFKEDIATSS---HCLVVGCSDNSVHLWDMLTSSSILEVRNPERCLLYSMR 184

Query: 284 MRGEQIEALHIASGTIYNE-IIVWKVV----FPNLSNPGKEPVNLTSLDHEAPQYRFHQL 120
           + G++++ L +ASGTIYNE IIVWK V     P+L +  K+ +N +S       +   Q 
Sbjct: 185 LWGDELQNLLVASGTIYNEVIIVWKAVPQNCTPSLGSSVKDHINSSSSFCNGFNHYSQQY 244

Query: 119 EAVAVCKLAGHEGSIFNLAWSSDGSKLVSVSDDRSARIW 3
           +A+ +C+LAGHEGSIF LAWSS+GSKLVSVSDDRSARIW
Sbjct: 245 QALNICRLAGHEGSIFRLAWSSNGSKLVSVSDDRSARIW 283


>emb|CBI37016.3| unnamed protein product [Vitis vinifera]
          Length = 1324

 Score =  176 bits (446), Expect = 2e-42
 Identities = 90/154 (58%), Positives = 111/154 (72%)
 Frame = -2

Query: 464 FNHWVLDVCFLEDAISSSSKSKQCLAIGCSDNTVCFWDMSRSSSSFEVKSPERCLLYSMK 285
           F+HWVLDVCF ++ I++SS    CL +GCSDN+V  WDM  SSS  EV++PERCLLYSM+
Sbjct: 128 FSHWVLDVCFFKEDIATSS---HCLVVGCSDNSVHLWDMLTSSSILEVRNPERCLLYSMR 184

Query: 284 MRGEQIEALHIASGTIYNEIIVWKVVFPNLSNPGKEPVNLTSLDHEAPQYRFHQLEAVAV 105
           + G++++ L +ASGTIYNEIIVWK V          P N T      P     Q +A+ +
Sbjct: 185 LWGDELQNLLVASGTIYNEIIVWKAV----------PQNCT------PSLGSSQYQALNI 228

Query: 104 CKLAGHEGSIFNLAWSSDGSKLVSVSDDRSARIW 3
           C+LAGHEGSIF LAWSS+GSKLVSVSDDRSARIW
Sbjct: 229 CRLAGHEGSIFRLAWSSNGSKLVSVSDDRSARIW 262


>ref|XP_003626031.1| WD repeat-containing protein [Medicago truncatula]
           gi|355501046|gb|AES82249.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 517

 Score =  174 bits (441), Expect = 7e-42
 Identities = 87/159 (54%), Positives = 109/159 (68%), Gaps = 5/159 (3%)
 Frame = -2

Query: 464 FNHWVLDVCFLEDAISSSSKSKQCLAIGCSDNTVCFWDMSRSSSSFEVKSPERCLLYSMK 285
           F HWVLDVCFL+  +  S+     LAIGCSDN+VC WD+S S+   +V+SP RCLLYSM+
Sbjct: 114 FGHWVLDVCFLKGCLPCSNVESDFLAIGCSDNSVCIWDISNSNVVLKVQSPVRCLLYSMR 173

Query: 284 MRGEQIEALHIASGTIYNEIIVWKVVFPNLSNPGKEPVNLTSLDHE-----APQYRFHQL 120
           + G  +E L IASGTI+NEI+VWKV      +P  +  + T  DH+         + +  
Sbjct: 174 LWGHNLEVLRIASGTIFNEIVVWKV------SPQHDKSSTTPEDHDRHGSNCSSLKDNMY 227

Query: 119 EAVAVCKLAGHEGSIFNLAWSSDGSKLVSVSDDRSARIW 3
           EAV VCKL GHEGSIF +AWSS GSKL+SVSDDRSAR+W
Sbjct: 228 EAVHVCKLVGHEGSIFRIAWSSCGSKLLSVSDDRSARVW 266


>ref|XP_002515207.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223545687|gb|EEF47191.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1385

 Score =  160 bits (406), Expect = 8e-38
 Identities = 86/163 (52%), Positives = 107/163 (65%), Gaps = 9/163 (5%)
 Frame = -2

Query: 464 FNHWVLDVCFLEDAISSSSKSKQCLAIGCSDNTVCFWDMSRSSSSFEVKSPERCLLYSMK 285
           FNHW+LDV F+        K   CL IGC DN+VC WD+S SS   +V+SPE+CLLYSM+
Sbjct: 129 FNHWLLDVSFV--------KENDCLGIGCGDNSVCIWDISSSSIILQVQSPEKCLLYSMR 180

Query: 284 MRGEQIEALHIASGTIYNEII-VWKVVFPNLSNPGKEPVNLTSL--------DHEAPQYR 132
           + G  +E+L IASGTI+NE+I +WKVV      P +  + L S         +  + Q  
Sbjct: 181 LWGYNLESLRIASGTIFNEVISIWKVV------PHEGSLTLRSALGDDKRLNNSSSTQLH 234

Query: 131 FHQLEAVAVCKLAGHEGSIFNLAWSSDGSKLVSVSDDRSARIW 3
             Q +AV + +L GHEGSIF LAWSSDGSKLVSVSDDRSARIW
Sbjct: 235 CQQYKAVHISRLVGHEGSIFRLAWSSDGSKLVSVSDDRSARIW 277


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