BLASTX nr result

ID: Cnidium21_contig00043463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043463
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321011.1| multidrug resistance protein ABC transporter...    64   1e-08
ref|XP_003591547.1| ABC transporter C family protein [Medicago t...    64   1e-08
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...    64   1e-08
ref|XP_003591546.1| ABC transporter C family protein [Medicago t...    64   1e-08
ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4...    62   4e-08

>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
 Frame = +2

Query: 32  MSPSCWLSDLECSASTIGFS---------QWLGFIFLSPCSQRXXXXXXXXXXXXXXXXX 184
           MS S W++ L CS+S +  S         QWL FIFLSPC QR                 
Sbjct: 1   MSSSSWINSLSCSSSVVQSSGETSIPLIFQWLRFIFLSPCPQRALLSSVDLLFLLFLLGF 60

Query: 185 XXQKLCSRFIYKHNINSASINEPLLGE-TDKSSYTVTLWFKLSLVV 319
             QKL SRF      + + IN PL+G    ++  T ++WFKLSL+V
Sbjct: 61  AAQKLHSRFT-SSGYSGSDINYPLVGNGNSRAHITTSIWFKLSLIV 105


>ref|XP_003591547.1| ABC transporter C family protein [Medicago truncatula]
           gi|355480595|gb|AES61798.1| ABC transporter C family
           protein [Medicago truncatula]
          Length = 1057

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
 Frame = +2

Query: 41  SCWLSDLECSAST------IGFSQWLGFIFLSPCSQRXXXXXXXXXXXXXXXXXXXQKLC 202
           S W++ L CS S+          QWL FIFLSPC QR                    KL 
Sbjct: 6   STWITSLSCSPSSGDAVAAYALPQWLRFIFLSPCPQRALLSAVDVLLLFTLLVFAITKLY 65

Query: 203 SRFIYKHNINSASINEPLLGETDKSSYTVTLWFKLSLV 316
           SRF   +  +S  IN+PL+  T   +   TLWFKL+L+
Sbjct: 66  SRFTSSNRTHSEEINKPLISNTRALNTRTTLWFKLTLI 103


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
 Frame = +2

Query: 32  MSPSCWLSDLECSASTIGFS---------QWLGFIFLSPCSQRXXXXXXXXXXXXXXXXX 184
           MS + W++ L CS+S I  S         QWL FIFLSPC QR                 
Sbjct: 1   MSSASWITTLSCSSSVIASSGETPFSLILQWLRFIFLSPCPQRALLSSIDLLFLLTLIAF 60

Query: 185 XXQKLCSRFIYKHNINSASINEPLLGETDKSSYTVTLWFKLSL 313
             QKL SRFI  +  +S++IN+PL+   +++    TLWFKL+L
Sbjct: 61  SVQKLYSRFI-SNGRSSSAINKPLI-RNNRARLRTTLWFKLTL 101


>ref|XP_003591546.1| ABC transporter C family protein [Medicago truncatula]
           gi|355480594|gb|AES61797.1| ABC transporter C family
           protein [Medicago truncatula]
          Length = 1515

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
 Frame = +2

Query: 41  SCWLSDLECSAST------IGFSQWLGFIFLSPCSQRXXXXXXXXXXXXXXXXXXXQKLC 202
           S W++ L CS S+          QWL FIFLSPC QR                    KL 
Sbjct: 6   STWITSLSCSPSSGDAVAAYALPQWLRFIFLSPCPQRALLSAVDVLLLFTLLVFAITKLY 65

Query: 203 SRFIYKHNINSASINEPLLGETDKSSYTVTLWFKLSLV 316
           SRF   +  +S  IN+PL+  T   +   TLWFKL+L+
Sbjct: 66  SRFTSSNRTHSEEINKPLISNTRALNTRTTLWFKLTLI 103


>ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/96 (43%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = +2

Query: 35  SPSCWLSDLECSAST-IGFSQWLGFIFLSPCSQRXXXXXXXXXXXXXXXXXXXQKLCSRF 211
           SPSC   D++ S+ T +   QWL FIFLSPC QR                    KL SRF
Sbjct: 12  SPSCSTLDIDSSSPTALLIVQWLRFIFLSPCPQRVLLSAVDSIFLLSLLAFAAAKLYSRF 71

Query: 212 IYKHNINSASINEPLLGETDKSSYTVTLWFKLSLVV 319
                 NS +I +PLL E D S Y VT WFKL L+V
Sbjct: 72  TSNATSNS-TITKPLLQEKD-SDYKVTFWFKLPLLV 105


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