BLASTX nr result

ID: Cnidium21_contig00043428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043428
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33743.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_003524669.1| PREDICTED: F-box-like/WD repeat-containing p...    79   4e-13
ref|XP_003550027.1| PREDICTED: F-box-like/WD repeat-containing p...    78   8e-13
ref|XP_003524668.1| PREDICTED: F-box-like/WD repeat-containing p...    78   8e-13
ref|XP_003611657.1| F-box-like/WD repeat-containing protein TBL1...    77   1e-12

>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/102 (43%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
 Frame = +1

Query: 1   KGIQYLEMEANREN---DLDDDFSIIRPLDLITKDVDELKQMIMERRKDRQKHVVKVINR 171
           KG+Q++EMEAN  N   D+DDDFS ++PLDLITKDV +L+QMI E++++ QK   K  ++
Sbjct: 56  KGLQFVEMEANLSNSDTDVDDDFSFLQPLDLITKDVHQLRQMIREKKRNLQKEKDKESDK 115

Query: 172 QHEAKSWRSARR-NQDNVEEHEKCWQPTQKSSRKNEDSGKGH 294
           +HE +  R  R+  Q+  +E EK     +K   K+++  K H
Sbjct: 116 EHELRQERQERQERQEKEKEREK-----EKEREKDKEREKQH 152


>ref|XP_003524669.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           isoform 2 [Glycine max]
          Length = 560

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = +1

Query: 1   KGIQYLEMEANREN---DLDDDFSIIRPLDLITKDVDELKQMIMERRKDRQKHVVKVINR 171
           KG+QY EMEAN  N   DL++DFS ++PLDLITKDV EL+QMI ERRK  QK   K   +
Sbjct: 56  KGLQYFEMEANLSNCDADLEEDFSFLQPLDLITKDVHELRQMISERRKKLQKERKKEFEK 115

Query: 172 QHEAKSWRSARRNQDNVEEHEKCWQPTQKSSRKNEDSGKGHKKH 303
           +HE +  R   +++   E+ ++      K  +K E+  +  ++H
Sbjct: 116 EHEGERVRVREKDRREREKEKE----VVKDRKKIENDKEREQQH 155


>ref|XP_003550027.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           [Glycine max]
          Length = 614

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   KGIQYLEMEANREN---DLDDDFSIIRPLDLITKDVDELKQMIMERRKDRQKHVVKVINR 171
           KG+QY EMEAN  N   DL++DFS ++PLDLITKDV EL+QMI ERRK  QK   K   +
Sbjct: 56  KGLQYFEMEANLSNCDADLEEDFSFLQPLDLITKDVHELRQMISERRKKLQKERKKEFEK 115

Query: 172 QHEAKSWRSARRNQDNVEEHEKCWQPTQKSSRKNEDSGKGHKK 300
           +HE +  R   R +D  E  ++  +  ++  ++ E   +  +K
Sbjct: 116 EHEGE--RVRVREKDRREREKEVEKDRRERDKEVEKDRREREK 156


>ref|XP_003524668.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           isoform 1 [Glycine max]
          Length = 607

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
 Frame = +1

Query: 1   KGIQYLEMEANREN---DLDDDFSIIRPLDLITKDVDELKQMIMERRKDRQKHVVKVINR 171
           KG+QY EMEAN  N   DL++DFS ++PLDLITKDV EL+QMI ERRK  QK   K   +
Sbjct: 56  KGLQYFEMEANLSNCDADLEEDFSFLQPLDLITKDVHELRQMISERRKKLQKERKKEFEK 115

Query: 172 QHEAKSWRSARRN-QDNVEEHEKCWQPTQKSSRKN 273
           +HE +  R   ++ ++  +E EK  +  +K   K+
Sbjct: 116 EHEGERVRVREKDRREREKEVEKERREREKEVEKD 150


>ref|XP_003611657.1| F-box-like/WD repeat-containing protein TBL1XR1 [Medicago
           truncatula] gi|355512992|gb|AES94615.1| F-box-like/WD
           repeat-containing protein TBL1XR1 [Medicago truncatula]
          Length = 625

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   KGIQYLEMEANREN---DLDDDFSIIRPLDLITKDVDELKQMIMERRKDRQKHVVKVINR 171
           KG+Q+LEMEAN  N   D D+DFS ++PLDLITKDV ELK+M+ ERR+ RQ+   K   +
Sbjct: 56  KGLQFLEMEANLNNCDADFDEDFSFLQPLDLITKDVHELKKMVNERRRKRQRGKTKESEK 115

Query: 172 QHEAKSWRSARRNQDNVEEHEKCWQPTQKSSRKNEDSGKGHKK 300
           +H+           D     EK  Q  +K   K++++ + HK+
Sbjct: 116 EHDG----------DRGLTREKERQEREKEREKDKENLENHKE 148


Top