BLASTX nr result

ID: Cnidium21_contig00043422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043422
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299514.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002303603.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003516709.1| PREDICTED: uncharacterized protein LOC100779...    62   6e-08

>ref|XP_002299514.1| predicted protein [Populus trichocarpa] gi|222846772|gb|EEE84319.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = +3

Query: 6   FPEATKWFLRSPHVILL---RIYSLVLAPFLKPLLACYINLWKLIATALIFAFN 158
           FP+A +W L+SPHVI+    +IYS +LAPF+ PLLA YI  W LIA    FA N
Sbjct: 212 FPKAAEWLLKSPHVIMQFCSKIYSRLLAPFVNPLLAGYIRAWNLIARLFAFALN 265


>ref|XP_002303603.1| predicted protein [Populus trichocarpa] gi|222841035|gb|EEE78582.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
 Frame = +3

Query: 6   FPEATKWFLRSPHVILL---RIYSLVLAPFLKPLLACYINLWKLIATALIFAFNVYVQI 173
           FP A +W L+SPHVI+    +IYS +LAP + PLLA YI  WK IA    FA N+ +Q+
Sbjct: 221 FPRAAEWLLKSPHVIMQFCSKIYSRLLAPLVNPLLAGYIRAWKPIARLFAFALNIRLQL 279


>ref|XP_003516709.1| PREDICTED: uncharacterized protein LOC100779471 [Glycine max]
          Length = 218

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
 Frame = +3

Query: 6   FPEATKWFLRSPHVIL---LRIYSLVLAPFLKPLLACYINLWKLIATALIFAFNVYVQIS 176
           FP+ T+WFLRSP+VIL   LR+Y++ +AP+L PLL  YI LW      L     V + IS
Sbjct: 154 FPKVTEWFLRSPNVILTWILRVYNIFVAPWLHPLLEGYIKLWGFFVRLLNSVITVVIFIS 213

Query: 177 KLFNK 191
           K F K
Sbjct: 214 KTFFK 218


Top