BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043402
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                           109   3e-22
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     106   2e-21
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   102   3e-20
gb|ABD78322.1| polyprotein [Primula vulgaris]                          99   4e-19
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    98   6e-19

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/140 (41%), Positives = 81/140 (57%)
 Frame = -2

Query: 438 KTIILTGRRGKRRFSILIDGGSTHSFIDENTASKLKCELVKTQPMKVQVANGNHLESHYE 259
           +T+ L G    RR  ILID GSTH+F+D   A+KL C       + V VA+GN L S   
Sbjct: 10  RTMRLCGTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLISSST 69

Query: 258 CKDFKWKIGDCEFHTSVRTLPMGGYDLVLGVDWLGALGLVTFDYKKLTLQFQHNGKLVVL 79
           C+ FKWK+   EF  ++  LP+ G D+VLGV WL  LG + +D+ KL ++FQ  G+ +VL
Sbjct: 70  CRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQFQGQKIVL 129

Query: 78  QGDAKPVKPRIQQMTAKAFV 19
           +G + P    I+    K  V
Sbjct: 130 RGSSGPSLKIIEGKQLKKMV 149


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/121 (42%), Positives = 73/121 (60%)
 Frame = -2

Query: 426 LTGRRGKRRFSILIDGGSTHSFIDENTASKLKCELVKTQPMKVQVANGNHLESHYECKDF 247
           L G+ GK +  I +D GSTH+FID   A ++ C+L  T+PM V  A G    + +  KDF
Sbjct: 475 LMGQYGKHKLHIFVDPGSTHNFIDIKVAKEINCKLEGTRPMTVDAALGGKTVTLFRSKDF 534

Query: 246 KWKIGDCEFHTSVRTLPMGGYDLVLGVDWLGALGLVTFDYKKLTLQFQHNGKLVVLQGDA 67
            W++    F T VRTLP+  +D+VLGV WL  LG + +D+  L ++F  NG   +L+G A
Sbjct: 535 TWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDFTYLRMEFTLNGAKYILRGTA 594

Query: 66  K 64
           K
Sbjct: 595 K 595


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/122 (40%), Positives = 76/122 (62%)
 Frame = -2

Query: 438 KTIILTGRRGKRRFSILIDGGSTHSFIDENTASKLKCELVKTQPMKVQVANGNHLESHYE 259
           KT+ + G   K+   ILID GSTH+F+D NTA+KL C++      +V VA+G  L    +
Sbjct: 388 KTMRVKGTYDKKIIFILIDSGSTHNFLDPNTAAKLGCKVDTAGLTRVSVADGRKLRVEGK 447

Query: 258 CKDFKWKIGDCEFHTSVRTLPMGGYDLVLGVDWLGALGLVTFDYKKLTLQFQHNGKLVVL 79
             DF WK+    F + +  +P+ G D+VLGV WL  LG +++++KKL ++F+ N + V+L
Sbjct: 448 VTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLGRISWEFKKLEMRFKFNNQKVLL 507

Query: 78  QG 73
            G
Sbjct: 508 HG 509


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/121 (41%), Positives = 73/121 (60%)
 Frame = -2

Query: 435 TIILTGRRGKRRFSILIDGGSTHSFIDENTASKLKCELVKTQPMKVQVANGNHLESHYEC 256
           +I   G+   ++ SIL+D GSTH+FID      LK   V++  M+V++ANG+ ++S   C
Sbjct: 290 SIRFVGKLKGQKVSILVDSGSTHNFIDPKWVPLLKLSNVQSDIMEVKIANGDKIKSSGTC 349

Query: 255 KDFKWKIGDCEFHTSVRTLPMGGYDLVLGVDWLGALGLVTFDYKKLTLQFQHNGKLVVLQ 76
           +  K  I + +F      LP+ GYDLVLGV WL  LG++  D+K LT+ F H  K V L+
Sbjct: 350 EKVKLLIQENQFEVDFLLLPLVGYDLVLGVHWLSQLGVINCDFKNLTMTFTHGNKKVCLK 409

Query: 75  G 73
           G
Sbjct: 410 G 410


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/122 (40%), Positives = 71/122 (58%)
 Frame = -2

Query: 438 KTIILTGRRGKRRFSILIDGGSTHSFIDENTASKLKCELVKTQPMKVQVANGNHLESHYE 259
           KT+ + G   KR   ILID GSTH+FID   A+KL C +      KV VA+G  L    +
Sbjct: 367 KTMGVKGTVDKRDLFILIDSGSTHNFIDSTVAAKLGCHVESAGLTKVAVADGRKLNVDGQ 426

Query: 258 CKDFKWKIGDCEFHTSVRTLPMGGYDLVLGVDWLGALGLVTFDYKKLTLQFQHNGKLVVL 79
            K F WK+    F + +  +P+ G D+VLGV WL  LG +++++KKL +QF +  + V L
Sbjct: 427 IKGFTWKLQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEFKKLEMQFFYKNQRVWL 486

Query: 78  QG 73
            G
Sbjct: 487 HG 488