BLASTX nr result

ID: Cnidium21_contig00043359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043359
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG29323.1| Receptor protein kinase, putative [Solanum bulboc...    93   2e-17
emb|CAG28412.1| S-receptor kinase-like protein 1 [Senecio squali...    90   2e-16
ref|XP_002298946.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002298945.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_003628329.1| Serine/threonine protein kinase [Medicago tr...    69   3e-10

>gb|ABG29323.1| Receptor protein kinase, putative [Solanum bulbocastanum]
          Length = 1433

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
 Frame = +2

Query: 56  DRKFPMWILNYKGNVLDG--DSSLHLTTTTFCQGYVIY-GCVANPSLPVCRSNAYRFEEI 226
           D  FP   LN+ G ++ G  DS ++     FC GY    GCV+N  LP CR +  +FE+ 
Sbjct: 233 DGSFPSLELNFNGAIVGGGEDSRVYALYNEFCYGYESQDGCVSN-QLPECRKDGDKFEQK 291

Query: 227 NADFI----NGNAVYDGDSSISLSDCMQRCWDDCSCLGFDNFSNGTGCIMYFG 373
           + DFI    N N+ YD ++S SL DCM+RCW+ CSC+GF   SNGTGCI++ G
Sbjct: 292 SGDFIDRSKNSNS-YD-NASTSLGDCMKRCWEHCSCVGFTTTSNGTGCIIWNG 342



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
 Frame = +2

Query: 65   FPMWILNYKGNVLDGDSSLHLTTTTFCQGYV-IYGCVANPSLPVCRSNAYRFEEINADFI 241
            FP   L   G +  GD S++     FC GY    GCV++  LP CR +  +FE+   DFI
Sbjct: 918  FPSLELFSDGAIAAGDGSIYTRYNKFCYGYGGDDGCVSS-QLPECRKDGDKFEQKRGDFI 976

Query: 242  NGNAV---YDGDSSISLSDCMQRCWDDCSCLGFDNF-SNGTGCIMYFG 373
            + +     Y  ++SISL DCMQ+CW+ CSC+GF    SNGTGC++  G
Sbjct: 977  DLSGTTTSYYDNASISLGDCMQKCWEHCSCVGFTTLNSNGTGCLISNG 1024


>emb|CAG28412.1| S-receptor kinase-like protein 1 [Senecio squalidus]
          Length = 637

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
 Frame = +2

Query: 68  PMWILNYKGNVLDGDSSLHLTTTTFCQGYVIYGCVANPSLPVCRSNAYRFEEINADFIN- 244
           PMWIL  KG + D D+S  + T  FC GY         SLP CR     F E N DF   
Sbjct: 95  PMWILTPKGQLRDSDNST-VWTPEFCYGYESSNGCVESSLPQCRREGDNFSEKNGDFAPD 153

Query: 245 -GNAVYDGDSSISLSDCMQRCWDDCSCLGFD-NFSNGTGCIMYFG 373
              +  D +SS+S+SDC  +CW+DCSC+GF+ + ++GTGC+++ G
Sbjct: 154 IARSATDDNSSLSISDCFVKCWNDCSCVGFNSSTTDGTGCVIWTG 198


>ref|XP_002298946.1| predicted protein [Populus trichocarpa] gi|222846204|gb|EEE83751.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
 Frame = +2

Query: 50  PVDRKFPMWILNYKGNVLDGDSSLHLTTTTFCQGYVI-YGCVANPSLPVCRSNAYRFEEI 226
           P +  F  W+L + G  L+  S+  ++    C G  I  GCV   S P CRS   R+E  
Sbjct: 259 PPETGFSKWLLQFGGG-LEEQSNEQISGGNLCNGNNIEMGCVKWDSEPTCRSRD-RYELR 316

Query: 227 NADFI--NGNAVYDGDSSISLSDCMQRCWDDCSCLGFD---NFSNGTGCIMYFG 373
             DF+   G+AVYD ++S+S+SDC + CW DC+C G +   + +N TGC  ++G
Sbjct: 317 ACDFLVEGGHAVYDNNASLSISDCREICWKDCTCAGINIRGSNANNTGCTFWYG 370


>ref|XP_002298945.1| predicted protein [Populus trichocarpa] gi|222846203|gb|EEE83750.1|
           predicted protein [Populus trichocarpa]
          Length = 741

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
 Frame = +2

Query: 59  RKFPMWILNYKGNVLDGDSSLHLTTTTFCQGYVIYGCVANPSLPVCRSNAYRFEEINADF 238
           R F MW L Y G++ D   +      T C+G    G     S P CRSN   FE  +  F
Sbjct: 253 RNFSMWQLEYDGSIAD-QRTRRTYGGTACKGNNTDGGCERWSGPACRSNRNSFELRSGSF 311

Query: 239 ING-NAVYDGDSSISLSDCMQRCWDDCSCLG---FDNFSNGTGCIMYFG 373
           +N     YD +SS+S+SDC   CW DC C+G     N +N TGC  ++G
Sbjct: 312 VNTVPRKYDDNSSLSISDCRDICWKDCQCVGVSTIGNNANNTGCTFFYG 360


>ref|XP_003628329.1| Serine/threonine protein kinase [Medicago truncatula]
           gi|355522351|gb|AET02805.1| Serine/threonine protein
           kinase [Medicago truncatula]
          Length = 788

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
 Frame = +2

Query: 56  DRKFPMWILNYKGNVLDGDSSLHLTTTTFCQGYVIYG-CVANPSLPVCRSNAYRFEEI-N 229
           D KF  W L  KG ++  D  +       C GY   G C     +P CR N   F++I  
Sbjct: 251 DGKFARWQLTSKGRLVGHDGEIG--NADMCYGYNSNGGCQKWEEIPNCRENGEVFQKIAG 308

Query: 230 ADFINGNAVYDGDSSISLSDCMQRCWDDCSCLGFDNF-SNGTGCIMY 367
              ++    ++ D + S SDC  RCW +C+C GF  F  NGTGCI Y
Sbjct: 309 TPNVDNATTFEQDVTYSYSDCKIRCWRNCNCNGFQEFYGNGTGCIFY 355


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