BLASTX nr result

ID: Cnidium21_contig00043332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043332
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    91   1e-16
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]    91   1e-16
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    89   3e-16
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]    89   3e-16
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]    89   3e-16

>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +3

Query: 3   YSQWSRSMEIALSSKLKLGFVDGTNLKPITGSPLLPYWNRCNHMVISWLLNSVSADIRNS 182
           Y  W+ +M+IAL +K K+GFVDGT  +P T  P    W+RCN MV SWLLNSVS  I  S
Sbjct: 37  YDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPTFRLWSRCNSMVKSWLLNSVSPQIYRS 96

Query: 183 IVYMDSAVSIWKELAIRYAQSNLP 254
           I+ ++ A  IW++L  R+  +NLP
Sbjct: 97  ILRLNDAADIWRDLHGRFHMTNLP 120


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/82 (50%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   YSQWSRSMEIALSSKLKLGFVDGTNLKPITGSPLLPYWNRCNHMVISWLLNSVSADIRNS 182
           YS WSR+M I+LS+K K+GFV G+   P +     P W RCN MVISWLLNS+  DI +S
Sbjct: 43  YSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLLNSIHPDIASS 102

Query: 183 IVYMDSAVSIWKELAIRYAQSN 248
           ++Y ++A  IW +L  R++Q N
Sbjct: 103 VIYAETASEIWADLRERFSQGN 124


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/84 (48%), Positives = 58/84 (69%)
 Frame = +3

Query: 3   YSQWSRSMEIALSSKLKLGFVDGTNLKPITGSPLLPYWNRCNHMVISWLLNSVSADIRNS 182
           Y+QWS +M+IAL +K K+ F+DG+  +P  G+ LL  W+RCN MV SW+LNSV+ +I  S
Sbjct: 76  YNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHLLRIWSRCNSMVKSWILNSVNREIYGS 135

Query: 183 IVYMDSAVSIWKELAIRYAQSNLP 254
           I+  D A  IW +L  R+  +NLP
Sbjct: 136 ILSFDDAAQIWNDLHNRFHMTNLP 159


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/82 (48%), Positives = 55/82 (67%)
 Frame = +3

Query: 3   YSQWSRSMEIALSSKLKLGFVDGTNLKPITGSPLLPYWNRCNHMVISWLLNSVSADIRNS 182
           YS WSR+M I+LS+K K+GFV G+   P +     P W RCN MVISWLLNS+  DI +S
Sbjct: 40  YSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLLNSIHPDIASS 99

Query: 183 IVYMDSAVSIWKELAIRYAQSN 248
           ++Y ++   IW +L  R++Q N
Sbjct: 100 VIYAETTSEIWADLRERFSQGN 121


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/84 (50%), Positives = 58/84 (69%)
 Frame = +3

Query: 3   YSQWSRSMEIALSSKLKLGFVDGTNLKPITGSPLLPYWNRCNHMVISWLLNSVSADIRNS 182
           Y+ WSR+M +AL++K K+ F+DG+   P +   L   W RCN MVISW+LNSV  DI +S
Sbjct: 50  YNTWSRAMVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNSMVISWILNSVHKDIADS 109

Query: 183 IVYMDSAVSIWKELAIRYAQSNLP 254
           ++Y D+AV IW +L  R+ QSN P
Sbjct: 110 LLYFDTAVGIWNDLRDRFCQSNGP 133


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