BLASTX nr result

ID: Cnidium21_contig00043319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043319
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like ...   323   2e-86
ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like ...   323   2e-86
ref|XP_002515715.1| translation elongation factor, putative [Ric...   317   2e-84
ref|XP_002313637.1| predicted protein [Populus trichocarpa] gi|2...   316   3e-84
ref|XP_002885535.1| elongation factor Tu family protein [Arabido...   313   2e-83

>ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like isoform 2 [Cucumis
           sativus] gi|449502885|ref|XP_004161770.1| PREDICTED:
           ribosome assembly protein 1-like [Cucumis sativus]
          Length = 1019

 Score =  323 bits (829), Expect = 2e-86
 Identities = 160/181 (88%), Positives = 172/181 (95%)
 Frame = +2

Query: 164 DFETEKIRNICILAHVDHGKTTLADHLIASSGGGVLHRKQAGRLRFLDYLDEEQRRAITM 343
           D ET +IRNICILAHVDHGKTTLADHLIA+SGGG++H K AGRLRF+DYLDEEQRRAITM
Sbjct: 3   DLETRRIRNICILAHVDHGKTTLADHLIAASGGGLIHPKMAGRLRFMDYLDEEQRRAITM 62

Query: 344 KSSSIGLQFDKHAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 523
           KSSSIGL++ +++INLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA
Sbjct: 63  KSSSIGLRYKEYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122

Query: 524 WIEKLTPCLVLNKIDRLICELKLTPMEAFNRLQRIVHEVNGIMSTYKSEKYLSDVDSILA 703
           WIEKL PCLVLNKIDRLICELKL+PMEA+ RL RIVHEVNGIMS YKSEKYLSDVDSILA
Sbjct: 123 WIEKLAPCLVLNKIDRLICELKLSPMEAYTRLLRIVHEVNGIMSGYKSEKYLSDVDSILA 182

Query: 704 G 706
           G
Sbjct: 183 G 183


>ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like isoform 1 [Cucumis
           sativus]
          Length = 1035

 Score =  323 bits (829), Expect = 2e-86
 Identities = 160/181 (88%), Positives = 172/181 (95%)
 Frame = +2

Query: 164 DFETEKIRNICILAHVDHGKTTLADHLIASSGGGVLHRKQAGRLRFLDYLDEEQRRAITM 343
           D ET +IRNICILAHVDHGKTTLADHLIA+SGGG++H K AGRLRF+DYLDEEQRRAITM
Sbjct: 3   DLETRRIRNICILAHVDHGKTTLADHLIAASGGGLIHPKMAGRLRFMDYLDEEQRRAITM 62

Query: 344 KSSSIGLQFDKHAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 523
           KSSSIGL++ +++INLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA
Sbjct: 63  KSSSIGLRYKEYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122

Query: 524 WIEKLTPCLVLNKIDRLICELKLTPMEAFNRLQRIVHEVNGIMSTYKSEKYLSDVDSILA 703
           WIEKL PCLVLNKIDRLICELKL+PMEA+ RL RIVHEVNGIMS YKSEKYLSDVDSILA
Sbjct: 123 WIEKLAPCLVLNKIDRLICELKLSPMEAYTRLLRIVHEVNGIMSGYKSEKYLSDVDSILA 182

Query: 704 G 706
           G
Sbjct: 183 G 183


>ref|XP_002515715.1| translation elongation factor, putative [Ricinus communis]
           gi|223545152|gb|EEF46662.1| translation elongation
           factor, putative [Ricinus communis]
          Length = 1028

 Score =  317 bits (811), Expect = 2e-84
 Identities = 156/185 (84%), Positives = 173/185 (93%), Gaps = 1/185 (0%)
 Frame = +2

Query: 158 VGDFE-TEKIRNICILAHVDHGKTTLADHLIASSGGGVLHRKQAGRLRFLDYLDEEQRRA 334
           +GDF+   K+RNICILAHVDHGKTTLADHLIA++GGG+LH K AG+LRF+DYLDEEQRRA
Sbjct: 1   MGDFDDARKVRNICILAHVDHGKTTLADHLIAATGGGLLHPKLAGKLRFMDYLDEEQRRA 60

Query: 335 ITMKSSSIGLQFDKHAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL 514
           ITMKSSSI L +  ++INLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL
Sbjct: 61  ITMKSSSIALHYKDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL 120

Query: 515 RQAWIEKLTPCLVLNKIDRLICELKLTPMEAFNRLQRIVHEVNGIMSTYKSEKYLSDVDS 694
           RQ+W+EKL+PCLVLNKIDRLICELKL+PMEA+NRL RIVHEVNGIMS YKSEKYLSDVDS
Sbjct: 121 RQSWLEKLSPCLVLNKIDRLICELKLSPMEAYNRLLRIVHEVNGIMSAYKSEKYLSDVDS 180

Query: 695 ILAGP 709
           IL+ P
Sbjct: 181 ILSAP 185


>ref|XP_002313637.1| predicted protein [Populus trichocarpa] gi|222850045|gb|EEE87592.1|
           predicted protein [Populus trichocarpa]
          Length = 976

 Score =  316 bits (810), Expect = 3e-84
 Identities = 156/185 (84%), Positives = 172/185 (92%), Gaps = 1/185 (0%)
 Frame = +2

Query: 158 VGDF-ETEKIRNICILAHVDHGKTTLADHLIASSGGGVLHRKQAGRLRFLDYLDEEQRRA 334
           +GDF ET  IRN+CILAHVDHGKTTLADHLIA++GGG+LH K AG+LRF+D+LDEEQRRA
Sbjct: 1   MGDFDETRNIRNMCILAHVDHGKTTLADHLIAATGGGLLHPKLAGKLRFMDFLDEEQRRA 60

Query: 335 ITMKSSSIGLQFDKHAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL 514
           ITMKSSSI L +  +++NLIDSPGHMDFCSEVSTAARLSDG LVLVDAVEGVHIQTHAVL
Sbjct: 61  ITMKSSSISLHYKDYSVNLIDSPGHMDFCSEVSTAARLSDGGLVLVDAVEGVHIQTHAVL 120

Query: 515 RQAWIEKLTPCLVLNKIDRLICELKLTPMEAFNRLQRIVHEVNGIMSTYKSEKYLSDVDS 694
           RQAWIEKLTPCLVLNKIDRLICELK++PMEA+NRL +IVHEVNGIMS YKSEKYLSDVDS
Sbjct: 121 RQAWIEKLTPCLVLNKIDRLICELKMSPMEAYNRLVKIVHEVNGIMSAYKSEKYLSDVDS 180

Query: 695 ILAGP 709
           I AGP
Sbjct: 181 IRAGP 185


>ref|XP_002885535.1| elongation factor Tu family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331375|gb|EFH61794.1| elongation factor Tu
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1015

 Score =  313 bits (802), Expect = 2e-83
 Identities = 156/182 (85%), Positives = 169/182 (92%)
 Frame = +2

Query: 164 DFETEKIRNICILAHVDHGKTTLADHLIASSGGGVLHRKQAGRLRFLDYLDEEQRRAITM 343
           D E  K+RNICILAHVDHGKTTLADHLIASSGGGVLH + AG+LRF+DYLDEEQRRAITM
Sbjct: 3   DSEGRKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITM 62

Query: 344 KSSSIGLQFDKHAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 523
           KSSSI L++  +++NLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA
Sbjct: 63  KSSSISLRYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122

Query: 524 WIEKLTPCLVLNKIDRLICELKLTPMEAFNRLQRIVHEVNGIMSTYKSEKYLSDVDSILA 703
           WIEKLTPCLVLNKIDRLI EL+L+PMEA+ RL RIVHEVNGI+S YKSEKYLSDVDSILA
Sbjct: 123 WIEKLTPCLVLNKIDRLISELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYLSDVDSILA 182

Query: 704 GP 709
            P
Sbjct: 183 SP 184


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