BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043310
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...   169   2e-40
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   144   8e-33
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   144   8e-33
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32

>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score =  169 bits (428), Expect = 2e-40
 Identities = 85/151 (56%), Positives = 110/151 (72%), Gaps = 4/151 (2%)
 Frame = -3

Query: 441 QTLTLPI-KSTPIL---KHDTLSEFPFKPNKHTVSYSNGPTVTDAHLNNLCSNGRLKEAI 274
           + L +PI K +PI    + DTLS F  KP K +V ++    +TD+HLN LC  GRL EA+
Sbjct: 2   ENLIMPIIKKSPISIPNEQDTLSAFSTKPTKSSVPFTK--KITDSHLNYLCKKGRLNEAV 59

Query: 273 DALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGDVDPFIETKLVSMYA 94
            AL+ I+Q G KV  KTF  L+ SCIDCNS+ LGRK+H + HL+ + +PF+ETKLVSMYA
Sbjct: 60  SALELIAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVHAHFHLVQEKNPFLETKLVSMYA 119

Query: 93  KCGCIDDARKVFDEMRERDLFTWSAMIGGFS 1
           KCG + DARK+F EMRE++L+TWSAMIG FS
Sbjct: 120 KCGSLSDARKLFGEMREKNLYTWSAMIGAFS 150



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = -3

Query: 315 LNNLCSNGRLKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGD 136
           ++ L  N +  +A+   + +  +  +    T +  + +C     +  G ++H     LG 
Sbjct: 317 ISGLAQNDKASKALHLFNDMILARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGF 376

Query: 135 V-DPFIETKLVSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGF 4
           V D  +   L+ MY+KCG +++A KVFD M E+D++TW++MIGG+
Sbjct: 377 VEDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGGY 421


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  150 bits (378), Expect = 1e-34
 Identities = 82/160 (51%), Positives = 104/160 (65%), Gaps = 13/160 (8%)
 Frame = -3

Query: 441 QTLTLPIKSTPIL----KHDTLSEFPFKPNKHTVSYSN---------GPTVTDAHLNNLC 301
           + L LP KS P L    K  T  E   +  +  VS++           P VTDAHLN+LC
Sbjct: 2   ENLILPCKSRPPLATPSKQGTSFECSSRIIQPRVSFTKIHQPLTPKLKPKVTDAHLNHLC 61

Query: 300 SNGRLKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGDVDPFI 121
            NGRL +AI  LD+I+Q G  VK  T+ +L+ SCID  S  LGRKLH  + LL +++PF+
Sbjct: 62  KNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARIGLLEEMNPFV 121

Query: 120 ETKLVSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGFS 1
           ETKLVSMYAKCG + +ARKVF EMRER+L+ WSAMIG +S
Sbjct: 122 ETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYS 161



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = -3

Query: 315 LNNLCSNGRLKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGD 136
           ++    N R  +A++    +  +G +    T T  I +C    ++  G +LH     +G 
Sbjct: 328 ISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGC 387

Query: 135 V-DPFIETKLVSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGF 4
           V D  +   L+ MY+K G ++DAR+VFD + ++D++TW++MIGG+
Sbjct: 388 VEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGY 432


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  144 bits (363), Expect = 8e-33
 Identities = 77/156 (49%), Positives = 106/156 (67%), Gaps = 9/156 (5%)
 Frame = -3

Query: 441 QTLTLPIKSTP-------ILKHDTLSEFPFKPNKHTV--SYSNGPTVTDAHLNNLCSNGR 289
           + L +P ++ P       ++K   L +F  KP K ++  +Y       D HL+ LCSNG 
Sbjct: 2   EKLAIPCQTNPPISGPASVIKPRPL-KFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGL 60

Query: 288 LKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGDVDPFIETKL 109
           L+EAI A+DSIS+ G K+ + T+  L+ +CID  SI LGR+LH  + L+  V+PF+ETKL
Sbjct: 61  LREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRVNPFVETKL 120

Query: 108 VSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGFS 1
           VSMYAKCGC+ DARKVFD M+ER+L+TWSAMIG +S
Sbjct: 121 VSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYS 156



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = -3

Query: 315 LNNLCSNGRLKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGD 136
           ++    + R+ +A+D    +  +G +  + T      +C    S+  G ++H     +G 
Sbjct: 323 ISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGI 382

Query: 135 V-DPFIETKLVSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGF 4
             +  +   L+ MY+KCG ++ AR VFD + E+D++TW++MIGG+
Sbjct: 383 ARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGY 427


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score =  144 bits (363), Expect = 8e-33
 Identities = 77/156 (49%), Positives = 106/156 (67%), Gaps = 9/156 (5%)
 Frame = -3

Query: 441 QTLTLPIKSTP-------ILKHDTLSEFPFKPNKHTV--SYSNGPTVTDAHLNNLCSNGR 289
           + L +P ++ P       ++K   L +F  KP K ++  +Y       D HL+ LCSNG 
Sbjct: 2   EKLAIPCQTNPPISGPASVIKPRPL-KFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGL 60

Query: 288 LKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGDVDPFIETKL 109
           L+EAI A+DSIS+ G K+ + T+  L+ +CID  SI LGR+LH  + L+  V+PF+ETKL
Sbjct: 61  LREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRVNPFVETKL 120

Query: 108 VSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGFS 1
           VSMYAKCGC+ DARKVFD M+ER+L+TWSAMIG +S
Sbjct: 121 VSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYS 156



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = -3

Query: 315 LNNLCSNGRLKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGD 136
           ++    + R+ +A+D    +  +G +  + T      +C    S+  G ++H     +G 
Sbjct: 323 ISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGI 382

Query: 135 V-DPFIETKLVSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGF 4
             +  +   L+ MY+KCG ++ AR VFD + E+D++TW++MIGG+
Sbjct: 383 ARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGY 427


>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 945

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/145 (49%), Positives = 99/145 (68%)
 Frame = -3

Query: 435 LTLPIKSTPILKHDTLSEFPFKPNKHTVSYSNGPTVTDAHLNNLCSNGRLKEAIDALDSI 256
           L +P  S+  L+    +      N  +++  + P + D  LN LC+NG L EA+  LDS+
Sbjct: 16  LLIPSHSSTQLEWHGSTRALANSNSVSMTQRSHPKLVDTQLNQLCANGSLSEAVAILDSL 75

Query: 255 SQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGDVDPFIETKLVSMYAKCGCID 76
           +Q G KV+  TF  L+ +CID + I++GR+LH  + L+  V+PF+ETKLVSMYAKCG +D
Sbjct: 76  AQQGSKVRPITFMNLLQACIDKDCILVGRELHTRIGLVRKVNPFVETKLVSMYAKCGHLD 135

Query: 75  DARKVFDEMRERDLFTWSAMIGGFS 1
           +ARKVFDEMRER+LFTWSAMIG  S
Sbjct: 136 EARKVFDEMRERNLFTWSAMIGACS 160



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = -3

Query: 315 LNNLCSNGRLKEAIDALDSISQSGFKVKSKTFTRLIYSCIDCNSIVLGRKLHGNVHLLGD 136
           ++     GR+ EA D L  +   G +  S T      +C    S+ +G ++H        
Sbjct: 327 ISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSM 386

Query: 135 VDPF-IETKLVSMYAKCGCIDDARKVFDEMRERDLFTWSAMIGGF 4
           VD   I   L+ MYAK G ++ A+ +FD M ERD+++W+++IGG+
Sbjct: 387 VDDILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYSWNSIIGGY 431