BLASTX nr result

ID: Cnidium21_contig00043294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043294
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   184   5e-45
emb|CBI30968.3| unnamed protein product [Vitis vinifera]              184   5e-45
emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]   184   5e-45
ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_002531059.1| brca1 associated ring domain, putative [Rici...   168   5e-40

>ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
            vinifera]
          Length = 1044

 Score =  184 bits (468), Expect = 5e-45
 Identities = 81/129 (62%), Positives = 91/129 (70%)
 Frame = +1

Query: 7    PNNIQCLFCHSVEDSEASGVMVHYLNGKPVKVGCSEAGNVIHVHRNCAEWAPNVYFRDDV 186
            PN I C FCHS +DSEASG MVHY NG+P+    +   N+IH HRNC EWAPNVYF D  
Sbjct: 646  PNKISCAFCHSAQDSEASGEMVHYFNGRPIAADHNGGSNIIHSHRNCTEWAPNVYFEDGT 705

Query: 187  VINLVAELARSKRIXXXXXXXXXXXXXXYEKSCRRSFHVPCANLTPQCRWDNENFVMLCP 366
             +NL AEL RS+RI              YEKSCR+SFH PCA LTPQCRWD +NFVMLCP
Sbjct: 706  AVNLKAELTRSRRITCCCCGIKGAALGCYEKSCRKSFHFPCAKLTPQCRWDTDNFVMLCP 765

Query: 367  IHASSKLPN 393
            +HASSKLPN
Sbjct: 766  LHASSKLPN 774


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score =  184 bits (468), Expect = 5e-45
 Identities = 81/129 (62%), Positives = 91/129 (70%)
 Frame = +1

Query: 7    PNNIQCLFCHSVEDSEASGVMVHYLNGKPVKVGCSEAGNVIHVHRNCAEWAPNVYFRDDV 186
            PN I C FCHS +DSEASG MVHY NG+P+    +   N+IH HRNC EWAPNVYF D  
Sbjct: 1015 PNKISCAFCHSAQDSEASGEMVHYFNGRPIAADHNGGSNIIHSHRNCTEWAPNVYFEDGT 1074

Query: 187  VINLVAELARSKRIXXXXXXXXXXXXXXYEKSCRRSFHVPCANLTPQCRWDNENFVMLCP 366
             +NL AEL RS+RI              YEKSCR+SFH PCA LTPQCRWD +NFVMLCP
Sbjct: 1075 AVNLKAELTRSRRITCCCCGIKGAALGCYEKSCRKSFHFPCAKLTPQCRWDTDNFVMLCP 1134

Query: 367  IHASSKLPN 393
            +HASSKLPN
Sbjct: 1135 LHASSKLPN 1143


>emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]
          Length = 952

 Score =  184 bits (468), Expect = 5e-45
 Identities = 81/129 (62%), Positives = 91/129 (70%)
 Frame = +1

Query: 7   PNNIQCLFCHSVEDSEASGVMVHYLNGKPVKVGCSEAGNVIHVHRNCAEWAPNVYFRDDV 186
           PN I C FCHS +DSEASG MVHY NG+P+    +   N+IH HRNC EWAPNVYF D  
Sbjct: 589 PNKISCAFCHSAQDSEASGEMVHYFNGRPIAADHNGGSNIIHSHRNCTEWAPNVYFEDGT 648

Query: 187 VINLVAELARSKRIXXXXXXXXXXXXXXYEKSCRRSFHVPCANLTPQCRWDNENFVMLCP 366
            +NL AEL RS+RI              YEKSCR+SFH PCA LTPQCRWD +NFVMLCP
Sbjct: 649 AVNLKAELTRSRRITCCCCGIKGAALGCYEKSCRKSFHFPCAKLTPQCRWDTDNFVMLCP 708

Query: 367 IHASSKLPN 393
           +HASSKLPN
Sbjct: 709 LHASSKLPN 717


>ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|222847593|gb|EEE85140.1|
            predicted protein [Populus trichocarpa]
          Length = 1029

 Score =  169 bits (428), Expect = 2e-40
 Identities = 81/127 (63%), Positives = 88/127 (69%)
 Frame = +1

Query: 13   NIQCLFCHSVEDSEASGVMVHYLNGKPVKVGCSEAGNVIHVHRNCAEWAPNVYFRDDVVI 192
            NIQC FC S E SEASG M+HY NG PV    +    VIH H+NCAEWAPNVYF  D  I
Sbjct: 635  NIQCAFCLSSEVSEASGEMIHYNNGIPVAADYNGGSRVIHSHKNCAEWAPNVYFEGDNAI 694

Query: 193  NLVAELARSKRIXXXXXXXXXXXXXXYEKSCRRSFHVPCANLTPQCRWDNENFVMLCPIH 372
            NL AELARS+RI              YEKSCR+SFHVPCA LT QCRWD ENFV+LCP+H
Sbjct: 695  NLEAELARSRRIKCCCCGLKGAALGCYEKSCRKSFHVPCAKLTHQCRWDTENFVILCPLH 754

Query: 373  ASSKLPN 393
            AS KLPN
Sbjct: 755  ASCKLPN 761


>ref|XP_002531059.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223529354|gb|EEF31320.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 987

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/125 (62%), Positives = 86/125 (68%)
 Frame = +1

Query: 19  QCLFCHSVEDSEASGVMVHYLNGKPVKVGCSEAGNVIHVHRNCAEWAPNVYFRDDVVINL 198
           +C FC S E+SEASG MVHY NG+PV         VIH HRNCAEWAPNVYF DD  INL
Sbjct: 603 RCSFCLSSEESEASGEMVHYYNGRPVAASYGGGYKVIHSHRNCAEWAPNVYFEDDTAINL 662

Query: 199 VAELARSKRIXXXXXXXXXXXXXXYEKSCRRSFHVPCANLTPQCRWDNENFVMLCPIHAS 378
            AEL RS+RI              YEKSCR+SFHV CA + PQCRWD +NFV LCP+HAS
Sbjct: 663 EAELTRSRRIKCCCCGLKGAALGCYEKSCRKSFHVTCAKMIPQCRWDTDNFVTLCPLHAS 722

Query: 379 SKLPN 393
           SKLPN
Sbjct: 723 SKLPN 727


Top